Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00761 ATGAAGGAAAAACCTCTTAAGGGCCCTTACCATCTTTGGATGTTCGTAACTGTGTTTTGCAGCTTTTGCTCATTGTTGCTTTGTGTTAACTCACAAGCAAGTGATGATGCCCCTGCAATGTTGGCTCTTAGGGAAAGCCTTCAAGTCCCAGACACTCTTGGTTGGACTGGTCCTGACCCTTGTGAATGGAAACTTATTGGCTGCTCCAACGACAAGCGAATCACCCGGATCCAAATTGGCCGCCAAAGCATTAAAGGTACGCTTACCCCAAGTCTCCAGAACCTCACGCAGTTAGAGCGGTTAGAGGTTCAGGATAACAGTATTTCAGGCCCTGTTCCTAGTTTGAAAGGGTTGAGTTCATTGCAAGTGGTTTTGCTTAGTGGGAATCAGTTTAGCTCTTTTCCTAGTGACTTTTTTGTTGGTATGTCTGCGCTGCAATCTATTGAGATTGATAAAAATCCTTTCTCGCCTTGGGAGATCCCTGAAAGCCTTAGAAACGCTACGGCGCTTCAGAACTTTTCAGCTAACTCTGCTAATATCACTGGAAAAGTCCCTGATTTTTTTAGTCCAGATGTGTTTCCTGGTCTCACCAATTTGCACCTTTCATTTAATTCTCTTTCTGGTGGGTTCCCCAAGAGCTTTGCTGGGTCACAAATTGAGTCTTTGTGGGTTAATGGTCAACACAGTGGAGAAAAGCTTACTGGGGGTATCGATGTTATACAGAATATGACTTTTTTGAAACAGCTTTGGTTGCATTCGAATGCGTTTTCAGGTCCATTGCCAGAGTTTAATGGGTTGAAAGATTTACAGGATTTGAGTTTGAGGGATAATATGCTCACTGGGCCTGTTCCGAGTTCTTTGGTTGGTCTGAAATCACTTAAAATTGTTAACTTGACGAATAATTTGCTTCAAGGTCCAGTGCCGGTGTTTGGAGCTGATGTTGCTCTTGATATGACCAAGGATTCTAATAGATTTTGCTTGCCAACACCTGGTGCATGCGATGCCCGTGTTAATATACTGCTTTCCATTGTAAAATCGATGGATTATCCACAACAGCTTGCTGACAACTGGAAGGGTAATGATCCTTGTAACAATTGGTTAGGCATTACATGTAGTGGTGGGAACATTATTGTTGTTAATTTTCAGAAAATGGGTCTCAATGGTACCATTTCACCTGACTTTGCATCACTCAAATCACTGCAAAGACTGATACTTTCTAATAACAATCTCACTGGAACAATTCCAGTTGAACTTACTAGCCTGCCTTACCTTACTGAACTAGATGTATCAAACAATCAGCTCTATGGAAAAGTCCCATCCTTCAAGAATGGTGTGAATTTGCTTACTCAAGGTAATGTTGATATCGGGAAGGACAGGCCTAGTGGTTCAGGTTCATCTCCATTATCTCCAGCTTCGTCAACAACAATTTCAGATGCAGGAAATGGTGGTAACTCTGCGAATGGTGGTAAGAAGTCTTCTAGTCTAGTCGGAGTGATTGTATTTTCTGTGCTAGGGGGTGTTTTTGTGGTTGGATTGATTGGTTTCTTAATTTTCTGTACATTCAAGATGAAGCAAAAGCGATTAAGCAGGGTGCAGAGCCCAAATGCAATGGTCATTCATCCTCATCATTCTGGCTCAGATGATGGGAGTGTAAAGATCACAGTTGCCGGCTCTAGTGTTAGTGTTGGTGCTATTGGTGAAGCTCATACTGTCCCTAGCAGTGAAGCTGGAGACATTCAAATGGTTGAAGCTGGAAACATGGTCATCTCAATACAAGTCCTGAGAAGTGTTACCAACAATTTCAGTGAGAAAAATATATTGGGAAGAGGGGGGTTTGGGACGGTTTACAAAGGTGAATTACATGATGGTACGCAAATTGCAGTGAAACGAATGGAATCTGGAGTAATTGCTGGGAAAGGGTTGGCAGAGTTTAAGTCTGAAATAGCTGTTTTGACAAAGGTCCGGCATCGTCATCTTGTTGCTCTTCTGGGTTACTGCTTAGACGGGAACGAGAGGCTTCTTGTTTATGAGTACATGCCTCAAGGGACACTTAGCAGCCATCTCTTTGATTGGCAAGAAGAAGGGAGGAAACCTCTGGAATGGAATAGAAGATTGACCATTGCCTTAGACGTGGCAAGGGGTGTTGAGTATCTGCATGGTCTTGCTCATCAGAGCTTTGTCCACAGGGATTTAAAACCTTCAAACATTCTCCTTGGAGATGATATGAGAGCAAAAGTTGCAGATTTTGGTCTTGTGCGTCTTGCTCCTGATGGGAAAGGCTCATTTGAGACAAGACTTGCCGGTACTTTCGGATATTTGGCACCTGAATATGCAACTACTGGCCGCGTGACAACCAAAGTTGATGTCTACAGTTTTGGAGTAATACTGATGGAAATGATTACAGGAAGGAAAGCTCTAGATGAGACACAACCTGAGGACAGCATGCACCTAGTGACATGGTTCCGCAGAATGCACCTGAACAAAGAATCCTTCCGCAAAGCTATCGATCCCACAATAGATCTCAATGAGGAAACACTTGCCAGTATAAACACAGTAGCTGAGTTAGCTGGCCACTGCTGTGCACGAGAGCCATACCAAAGGCCTGATATGGGTCATGCTGTCAATGTTCTATCCTCTCTAGTAGAGCTGTGGAAACCATCTGACCAAAGCTCTGAAGACATATATGGGATTGATTTTGACATGTCATTACCTCAAGTGCTTAAGAAATGGCAAGCTTATGAAGGAAGAAGTGAAATGGAGTCATCTTCTTCATCGCTTCTGCCTAGCCTAGACAGTACACAGACCAGCATACCTACACGCCCCTATGGTTTTGCTGAGTCATTCACCTCAGCCGATGGGAGATGA 2865 0.4342 MKEKPLKGPYHLWMFVTVFCSFCSLLLCVNSQASDDAPAMLALRESLQVPDTLGWTGPDPCEWKLIGCSNDKRITRIQIGRQSIKGTLTPSLQNLTQLERLEVQDNSISGPVPSLKGLSSLQVVLLSGNQFSSFPSDFFVGMSALQSIEIDKNPFSPWEIPESLRNATALQNFSANSANITGKVPDFFSPDVFPGLTNLHLSFNSLSGGFPKSFAGSQIESLWVNGQHSGEKLTGGIDVIQNMTFLKQLWLHSNAFSGPLPEFNGLKDLQDLSLRDNMLTGPVPSSLVGLKSLKIVNLTNNLLQGPVPVFGADVALDMTKDSNRFCLPTPGACDARVNILLSIVKSMDYPQQLADNWKGNDPCNNWLGITCSGGNIIVVNFQKMGLNGTISPDFASLKSLQRLILSNNNLTGTIPVELTSLPYLTELDVSNNQLYGKVPSFKNGVNLLTQGNVDIGKDRPSGSGSSPLSPASSTTISDAGNGGNSANGGKKSSSLVGVIVFSVLGGVFVVGLIGFLIFCTFKMKQKRLSRVQSPNAMVIHPHHSGSDDGSVKITVAGSSVSVGAIGEAHTVPSSEAGDIQMVEAGNMVISIQVLRSVTNNFSEKNILGRGGFGTVYKGELHDGTQIAVKRMESGVIAGKGLAEFKSEIAVLTKVRHRHLVALLGYCLDGNERLLVYEYMPQGTLSSHLFDWQEEGRKPLEWNRRLTIALDVARGVEYLHGLAHQSFVHRDLKPSNILLGDDMRAKVADFGLVRLAPDGKGSFETRLAGTFGYLAPEYATTGRVTTKVDVYSFGVILMEMITGRKALDETQPEDSMHLVTWFRRMHLNKESFRKAIDPTIDLNEETLASINTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDQSSEDIYGIDFDMSLPQVLKKWQAYEGRSEMESSSSSLLPSLDSTQTSIPTRPYGFAESFTSADGR* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00761 954 Gene3D Ribonuclease Inhibitor 33 333 IPR032675 -
Pte16g00761 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Pte16g00761 954 MobiDBLite consensus disorder prediction 452 489 - -
Pte16g00761 954 FunFam Leucine-rich repeat receptor-like kinase 335 458 - -
Pte16g00761 954 SMART serkin_6 601 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00761 954 PANTHER OSJNBA0070M12.3 PROTEIN 16 954 - -
Pte16g00761 954 MobiDBLite consensus disorder prediction 919 943 - -
Pte16g00761 954 FunFam receptor protein kinase TMK1 679 896 - -
Pte16g00761 954 MobiDBLite consensus disorder prediction 919 954 - -
Pte16g00761 954 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Pte16g00761 954 Pfam Leucine rich repeat N-terminal domain 338 372 IPR013210 -
Pte16g00761 954 CDD STKc_IRAK 607 880 - -
Pte16g00761 954 Gene3D Transferase(Phosphotransferase) domain 1 679 899 - -
Pte16g00761 954 Pfam Leucine rich repeat 394 434 IPR001611 GO:0005515
Pte16g00761 954 MobiDBLite consensus disorder prediction 462 489 - -
Pte16g00761 954 ProSiteProfiles Protein kinase domain profile. 601 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00761 954 SUPERFAMILY Protein kinase-like (PK-like) 589 894 IPR011009 -
Pte16g00761 954 Pfam Protein kinase domain 602 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00761 954 ProSitePatterns Protein kinases ATP-binding region signature. 607 639 IPR017441 GO:0005524
Pte16g00761 954 SMART LRR_typ_2 397 421 IPR003591 -
Pte16g00761 954 SMART LRR_typ_2 118 141 IPR003591 -
Pte16g00761 954 SMART LRR_typ_2 193 216 IPR003591 -
Pte16g00761 954 Gene3D Phosphorylase Kinase; domain 1 563 678 - -
Pte16g00761 954 Gene3D Ribonuclease Inhibitor 334 459 IPR032675 -
Pte16g00761 954 SUPERFAMILY L domain-like 55 447 - -
Pte16g00761 954 FunFam Receptor-like kinase TMK4 34 331 - -
Pte16g00761 954 FunFam receptor protein kinase TMK1 563 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00761 Pte-Chr16 25267188 25270998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00761 33 879 Receptor kinase-like Gene Family AT1G75820 28.321 4.44e-86 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pte16g00761 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00761 K00924 - qsa:O6P43_014259 1438.32