Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00757 ATGAGTTCTTCTTCCCCGATAAAGGTAGATCAGGTTGAGGAAAAGACTGAAAATATACCCTGCAAACCGAGGTGGCTTGAGCCATTCCTGAGAAAAACATTTTTTGATGGCTGTGACGACCATCCAGATCGCAGAAATGAGTTGAATAAGTATTGTATCAACTGCAATCAGTCTGCTTGTCAATACTGCGTGTCTTCAGGTAGTCACCGGAACCACAAAATACTTAAGATCTATAGACATGTCTACAAGGATGTTGTCTCTCTTGCCTCCATTGAAAAGCATATTGATTGTTCCCAAATCCAGCCATATAAGTGCAACAAGCGATTGGTTATAGCTCTGAATCCTCTTCCCCACTGTGGCTCGACATCTATTGCTGGAGCATCTTGTGAAACATGCCAAAGAAGGTTGACTGAACCAGATACATATCATTACTGCTCCATTTCATGCAAGAACACTGCTGTCTCAAGGAAGCTCCAGGATTCAACTCCTCCCTTCATTGTTATCCAGGACGCAAACCAGGAAAGAGAGAAGACAAGTTGTCCGAGGAGAGCTAGCAGACGAAAAGGAAAACCTTGCAGGGCACCTTTCTTCTAG 594 0.436 MSSSSPIKVDQVEEKTENIPCKPRWLEPFLRKTFFDGCDDHPDRRNELNKYCINCNQSACQYCVSSGSHRNHKILKIYRHVYKDVVSLASIEKHIDCSQIQPYKCNKRLVIALNPLPHCGSTSIAGASCETCQRRLTEPDTYHYCSISCKNTAVSRKLQDSTPPFIVIQDANQEREKTSCPRRASRRKGKPCRAPFF* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00757 197 Gene3D Classic Zinc Finger 32 77 - -
Pte16g00757 197 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 22 194 - -
Pte16g00757 197 MobiDBLite consensus disorder prediction 173 197 - -
Pte16g00757 197 Pfam B-box zinc finger 38 77 IPR000315 GO:0008270
Pte16g00757 197 CDD Bbox2 38 77 - -
Pte16g00757 197 SUPERFAMILY B-box zinc-binding domain 38 79 - -
Pte16g00757 197 ProSiteProfiles Zinc finger B-box type profile. 38 77 IPR000315 GO:0008270
Pte16g00757 197 Pfam PLATZ transcription factor 79 150 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00757 Pte-Chr16 25230844 25235191 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pte16g00757 PLATZ 3.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00757 - - qsa:O6P43_014262 285.419