Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00753 ATGGTCGAAGATTGGATGGTGTCTGCAGCTATGGCTATTCAGGGACAGAGTGGAGGTACTGGATCACACAGTACTTCTCCAGCAGGAAATGGAGGATCTATCAGTTCTGGACTGCATTCTGTGACTGGCATTCAACTAATGGAGCAGTTCAATTCTGGAAGTGACTATGCTCCTAAGGTAAGGAAACCATATACCATCACTAAACACAGAGAGAGATGGACTGAGGAAGAACATAAGAAGTTCCTTGAAGCGTTAAAGCTCTATGGCCGGGCCTGGCGAAAAATAGAAGAACATGTTGGCACAAAGACTGCAGTTCAAATTCGAAGTCATGCTCAGAAGTTTTTCTCTAAGGTTAATCGTGAGTCAAATGTGGGCGATTCTGTTGAACCTGTTGAGATTCCGCCACCTAGGCCGAAGAGAAAACCTGTGCATCCTTATCCCCGGAAGAATGTACAACCTCCCAATTGGAAAAAACTCAGACTAGAAAGCCCAATGAGATCTAGTTCACCAAATTCTGCCATTTGTAATCATGAAAATCAGTCTCCGCAATCAGTTTTATCAGCTTTTGGTTCTGAAACACTGGGTTCCACAGACTCAGATACACTAAATGGCAGCTTATCCCCAACGTCAACTTTTACTGTCAATAAAAGCTCCCTAGTGCTTAATGATCCGAAAACTGTGTTGGAAGAAGGCTTTCTAGAATCCACTCAATTCACCATCACCTCTAAGCCACCTGTCGGGCACTCAGCGTTCTTCCCCGGGAACAATGTCAATCCTATAGAAGAGACAGCAGGCACAATACTCAGGCTTTTCGGGAGAACTGTACTGGTGAAAGATGACCAAGAAAACACACAATCATCATCCTTGAACTTCAGTCAAGTAGAATCTTCAGCTGATAATGCACAGCGCTGTAGGAATGGCATGAGAAAGGGACCAAATTATATTGCGAACCATGTGCAACATCAGAGTGTTGATTCCAATTTGGAAGAAGCCCGTGCTGCTGCTTTTGTCTTATGTTCTTTCATGCCAAACCAAAAGCAATTGCTTGAGGAGGAACATGAGCAGTTGGAAACATCCTTCTCAAGCACAGCATTGGTGAACAGCAGGCGAAAGAGTGAATCGTCAGAGAGAGCAAGCCATCCACTTTTCTGTTGTAAAGGGTTCGATACTAAGGCAAGTGATTGCTCAGTCATCTCCGAAGTAAGAACCAAATGTGAAAGATCCCAAGGTTTTGTGCCATATAAAAGAATTGTTGCAAAAAGGGATGGTTTCTGCTCAATGATGAAAAATAAGGAGACGGAAGATCAACCTATCCATCTCTCCTTATAG 1329 0.4357 MVEDWMVSAAMAIQGQSGGTGSHSTSPAGNGGSISSGLHSVTGIQLMEQFNSGSDYAPKVRKPYTITKHRERWTEEEHKKFLEALKLYGRAWRKIEEHVGTKTAVQIRSHAQKFFSKVNRESNVGDSVEPVEIPPPRPKRKPVHPYPRKNVQPPNWKKLRLESPMRSSSPNSAICNHENQSPQSVLSAFGSETLGSTDSDTLNGSLSPTSTFTVNKSSLVLNDPKTVLEEGFLESTQFTITSKPPVGHSAFFPGNNVNPIEETAGTILRLFGRTVLVKDDQENTQSSSLNFSQVESSADNAQRCRNGMRKGPNYIANHVQHQSVDSNLEEARAAAFVLCSFMPNQKQLLEEEHEQLETSFSSTALVNSRRKSESSERASHPLFCCKGFDTKASDCSVISEVRTKCERSQGFVPYKRIVAKRDGFCSMMKNKETEDQPIHLSL* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00753 442 MobiDBLite consensus disorder prediction 120 182 - -
Pte16g00753 442 SMART sant 69 117 IPR001005 -
Pte16g00753 442 Gene3D - 72 119 - -
Pte16g00753 442 CDD SANT 72 115 IPR001005 -
Pte16g00753 442 NCBIfam myb-like DNA-binding domain, SHAQKYF class 68 117 IPR006447 GO:0003677
Pte16g00753 442 MobiDBLite consensus disorder prediction 162 182 - -
Pte16g00753 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Pte16g00753 442 SUPERFAMILY Homeodomain-like 64 120 IPR009057 -
Pte16g00753 442 FunFam protein REVEILLE 6 isoform X1 72 120 - -
Pte16g00753 442 Pfam Myb-like DNA-binding domain 70 113 IPR001005 -
Pte16g00753 442 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Pte16g00753 442 ProSiteProfiles SANT domain profile. 68 119 IPR017884 -
Pte16g00753 442 PANTHER SWI/SNF COMPLEX-RELATED 30 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00753 Pte-Chr16 25092820 25096194 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte16g00753 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00753 - - qsu:111984846 302.367