Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00750 ATGGCTCCTGTCTCACTGCCTCCTGGGTTTAGGTTCCATCCAACAGATGAGGAACTCATTGCTTACTACCTTAAAAGAAAAATCAATGGCCGGAGAATCGAATTAGAGGTTATTCCAGAAGTTGATCTTTACAAGTGTGAACCCTGGGACTTGCCAGGTAGATCATTATTGCCAGGCAACGATCTTGAATGGTATTTCTTTAGTCCTCGAGATCGAAAATATCCAAATGGTTCAAGAACGAATCGTGCAACCAAAGCTGGATACTGGAAGGCCACAGGTAAGGATCGCAAGGTGATGTCCCAATCTAGAGCTGTTGGCATGAAGAAAACCCTAGTCTATTATCGTGGCAGGGCTCCACATGGTTCTCGCACTGGTTGGGTTATGCATGAGTATCGTCTGGACGAAAAAGAATGTGAATTTGCCAATGGCTTGCAGGATGCTTATGCACTTTGTCGTATTTTAAAGAAAAGTATAATCATCACTCCGAAGAATGGAGAGCAACATGTTAATCATAACCATGTTAAACAAATGGCGAATGATCAGTCATCAACCATTGACATGTACTCCGAAGGAAGAAGCACTGAAGAGATGGAGAACTCGAGTTATCTGATGTCTCAGAATTGTAGTTCACCTTATAACGTTGGTCATGAATCTTCGTTTGACATGAGTGATCAGACAGCATCATATGGAAAATGGACACAGTTCTCATCTCAAAGTTCACGCAATTTTCCAACATCTTCATATCAAAATTGTGGATCATCATCAGCTATGTCATACCCGTCCGAGGTTGATATAGCTATAGAATGTGCAAGGATGCATCATAAGATTGCTTTGCCTCAATTAGAAGTTGAGGATTTCCCAGAAGCAGGAATGAGAGAATTTATCATGCCACATTCCTCTACCATACTTCAAAGCAGAAGTGAAACTGATATCTTGCAGGAAATTCTTTCAGTTGCACAAGCTTCCAAGGAACTGATGAGTCAATCCATTGAATCCAACAACTCGGATCCTTGGGGTGGAAATCAATATTATACTCCTGAAGACGATTTCACCTTCATGATTGCGAAGGATCACGCCAATGAAAGGAGTGATTATGATGTTATCAGACATAAGGTGACACGTGAGCATCAAGGTGTAAACATAAGGTCCATAGAGATTGAGGATTTTGACCAACATTTGAAGACTTCAGAGGGAGTGGTGGAGAACTTGAGATGGGTTGGAATGTCAAATGATGATCTACAAAAGAGTTCCATAGAGCAGCAGCACAAGGTAGTACCAATTGAGAAGATAACCGGCTATCAAGAGGCAAGAGGTGAAATGGCGCCCCAGAGCAGCATCAAGCAAGACAGTGACAAGGACATCAGTGATTTTTCACTCGGGTTCATAAATGATGTTGATCACTCAAACAAAAATTTCCTAGATGATGGTGATGACATGGAAAAATATTCAAGTTCTCAATGTTTTGAGGTCTTTGAGGAAATAAAAGTAAACCATGGGATGTTTGTTATTTCAACTCGACAAGCAGCTGACACATTCTTTCACCAAATAGTTCCTTCACAAACAGTTAAGCTCCAACTAAAGCCAGCGGACTCAAATGAGAGCTCTACAGTTAAAGCAAAGACAGTAAGAGAACCAAATGGCTTAGTCTGTTCATCAAGGGCAAAGGTAAAGGCATTTGCGATGGCAAAACTCAAGGGGATGGACATGTTCATCAAGGCATCAAAGAGAATGATAGGAAGTTCAATGTTTTTTATCTTTGCATTTGTAGTTACGTGCTGTGTTAATCTTCAAATATATATGGAGCCTGAGAAATTGGTCGAGAAGGCCGCCAAGGATTTCTGTCATGTGAGTAACAAAACTGCTGAGAAGATTCTGTCATCTGAGGCAATCAAGTGGAATGGTAGAAAAGAAAAGGGTTGGTATGTTAATCTAAGGATTGGGAATAGAGTAGGCGTGGGGTTGAAGAGATTAGGCATTTTCCTGACAGTTTCTTTTGCTCTTTGTACAATATGGGCTACTAGTTAA 2025 0.4089 MAPVSLPPGFRFHPTDEELIAYYLKRKINGRRIELEVIPEVDLYKCEPWDLPGRSLLPGNDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVMSQSRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDEKECEFANGLQDAYALCRILKKSIIITPKNGEQHVNHNHVKQMANDQSSTIDMYSEGRSTEEMENSSYLMSQNCSSPYNVGHESSFDMSDQTASYGKWTQFSSQSSRNFPTSSYQNCGSSSAMSYPSEVDIAIECARMHHKIALPQLEVEDFPEAGMREFIMPHSSTILQSRSETDILQEILSVAQASKELMSQSIESNNSDPWGGNQYYTPEDDFTFMIAKDHANERSDYDVIRHKVTREHQGVNIRSIEIEDFDQHLKTSEGVVENLRWVGMSNDDLQKSSIEQQHKVVPIEKITGYQEARGEMAPQSSIKQDSDKDISDFSLGFINDVDHSNKNFLDDGDDMEKYSSSQCFEVFEEIKVNHGMFVISTRQAADTFFHQIVPSQTVKLQLKPADSNESSTVKAKTVREPNGLVCSSRAKVKAFAMAKLKGMDMFIKASKRMIGSSMFFIFAFVVTCCVNLQIYMEPEKLVEKAAKDFCHVSNKTAEKILSSEAIKWNGRKEKGWYVNLRIGNRVGVGLKRLGIFLTVSFALCTIWATS* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00750 674 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Pte16g00750 674 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Pte16g00750 674 FunFam Nac domain-containing protein 86 15 159 - -
Pte16g00750 674 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Pte16g00750 674 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Pte16g00750 674 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00750 Pte-Chr16 24844219 24848383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00750 1 595 NAC Transcription Factor Family AT1G65910 44.554 3.48e-150 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte16g00750 NAM 5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00750 - - qsa:O6P43_014229 677.552