Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00746 ATGGCTATTGTAAAGGTCGCTGAGGCTTTTCTTGATGGCTCCGTGGTTGTTTCTGTGCTTACCATTGAAGAGGGCATCTTTGAAGCTTGTGAATCATTTTGGCAAGAGTTCAAAAGAAAGCGCAAGAAGGATATCAGCAGGAAAGCCAAAGCTTTAAGGAGATTGAGGACTGCATGTGAAAGAGTAAAGAGGACTCTCTCTTCGACCAGTCAAACTACAATTGAGATTGATTCACTCTATGAAGGTATTGATTTTTATTCCACCATTACTAGAGCTCGTTTTGAAGAGTTGAACATGGATCTGTTTAGGAAATGTATGAAGCCTGTGGAGAAATGTTTGCGTGACTCAAAGATTGACAAGGCTCAGGTTCATGAGGTCGTTCTCGTTGGTGGGTCTACAAGGATTCTGCAAAAGCATTAA 420 0.4143 MAIVKVAEAFLDGSVVVSVLTIEEGIFEACESFWQEFKRKRKKDISRKAKALRRLRTACERVKRTLSSTSQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMKPVEKCLRDSKIDKAQVHEVVLVGGSTRILQKH* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00746 139 Gene3D - 10 138 - -
Pte16g00746 139 FunFam Heat shock 70 kDa protein 29 104 - -
Pte16g00746 139 SUPERFAMILY Actin-like ATPase domain 17 135 IPR043129 -
Pte16g00746 139 Gene3D Actin; Chain A, domain 4 30 100 - -
Pte16g00746 139 Pfam Hsp70 protein 31 135 IPR013126 GO:0005524|GO:0140662
Pte16g00746 139 PANTHER HEAT SHOCK PROTEIN 70KDA 31 135 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00746 Pte-Chr16 24698643 24699115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00746 13 135 Calmodulin-binding Proteins AT5G02500 70.213 1.26e-62 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00746 K03283 - ming:122084689 192.2