Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00734 ATGATATCTGGCTTACAGCACCCAAACCTTGTGAAATTATATGGATGCTGTATTGAAGGGAAACAACTCTTGCTGGTGTATGAATACATGGAAAACAACAGTCTTGCACATGCTTTGTTTGGCTCCAAAAAAGATGGTACGGAACTGGATTGGCCTACAAGGCAAAAGATTTGCGTTGGCATGGCAAGAGGCCTAGCTTTCCTTCATGAGGAATCTACAATAAAGATTGTTCATAGAGATATCAAGACTCACAATGTACTACTGGACACAGATCTTAACCCCAAGATTTCAGACTTCGGTTTGGCAAAGCTTGATGAAGAAGATAACACTCACATAACCACCAGAATCGCTGGAACTATTCCTAACCTTTATTGCCATCTCCTATGTGTATCCAAAATCTATTGGTTTTTACCAAACAACTCATTGGTGTGTGGTGTGGCACTTGTATTACAGCAAAAAGGAAACCTAATGGAGCTAGTAGATCCAAAGTTAGGGACCAACTTCAACCAGGAAGAGGTAGTGAGAATGATAAGAGTAGCTCTACTATGCACTAATCCTTCACCGGCACTTAGACCAACCATGTCTGCAGTGGTAAGAATGCTTGAAGGCCACACCATGGTTCCTCAACTAATCATGGATCCAAGCATATATGGTGATGAACTCAGGTTAAAAGCCTTGATGAATCAATCTTATCATTTTCCACAGCCACAAGAAAGCTCTTGTGAAACTGAGAGTCTCATCCATACTACAAAAGCCACATGGGATGAATCCCATAACAGCACATCATCACTATCCAATCATTAA 804 0.4092 MISGLQHPNLVKLYGCCIEGKQLLLVYEYMENNSLAHALFGSKKDGTELDWPTRQKICVGMARGLAFLHEESTIKIVHRDIKTHNVLLDTDLNPKISDFGLAKLDEEDNTHITTRIAGTIPNLYCHLLCVSKIYWFLPNNSLVCGVALVLQQKGNLMELVDPKLGTNFNQEEVVRMIRVALLCTNPSPALRPTMSAVVRMLEGHTMVPQLIMDPSIYGDELRLKALMNQSYHFPQPQESSCETESLIHTTKATWDESHNSTSSLSNH* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00734 267 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00734 267 Gene3D Transferase(Phosphotransferase) domain 1 126 210 - -
Pte16g00734 267 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 237 - -
Pte16g00734 267 FunFam Os07g0541700 protein 30 119 - -
Pte16g00734 267 SUPERFAMILY Protein kinase-like (PK-like) 3 232 IPR011009 -
Pte16g00734 267 Gene3D Transferase(Phosphotransferase) domain 1 1 125 - -
Pte16g00734 267 Pfam Protein kinase domain 2 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00734 267 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00734 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00734 Pte-Chr16 24221428 24222939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00734 1 264 Receptor kinase-like Gene Family AT1G53440 53.082 5.18e-86 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte16g00734 PK_Tyr_Ser-Thr 5.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00734 - - qsa:O6P43_032039 355.14