Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00724 ATGGCCGGTGATGAGAAGGAGAAAGGCGTGAGGTTGGTTCCACCAGACGAGCTCCGGTGTACCAGGTGTGACGGCAAGACATGGCGTTGCCAGCATTGGCGAATTCACAATCAAAGTTACTGTGAGGACCACTACCTCAACATGAAGGCCATGCCATTGAAGAATCGAAAAAATCTCAACGGTGGTGAAAGCATGAGTGGAGCCCTTGCTGTTTTCGGTACCCGCCAGAGAAGCAAGAGAAGAAATCCCCAAAAGGATTTAAAGTTGGATTCTTTCGGTCGAAGGACTGATACCCAGAAGGTCCAAGAAACCGGTGATATAGAAGAATATAAAGTTTTGGATCGAAAGAAGCATGTGATTAGTAACAATGTTGGCTGCAGCAATAGAGCTCTAACAGTTTTGGAAGAGGATGAACTTTTGCCTCGGAAGAAGGATCGGAGGACTACCAACAGTTTTAGCTGTATAACTAGTAGAGCTCTAACGAATAATACTCAGAAGGACCAAGAGATCAGTGAGACAGAAGAAGATGATGTTGTGCCTCAAAAGAAGGATGGGACTAGTAAAAATGTTAGTTCTAGTACCAATAGATGTTGTGATGATGCCAATCGAGGCAGTGATAGTATTAATGCGGGTAGTTTTTTGAATGGAGAGATATTGTTTAATCGTAAGTATGGGAAGGGGACGAAGAGGGCAAGAGAAGCATTTGAAGACAAGAAAGAGGGCGAGATCGATGTTGAGAAGAAAACTAGAAGTGTGAATATTGAAGACTCCGTTGGGGAAGAGACAAAACGTAGCAAAAGTGATCTTCTAGTGTATAGGAGAAGGGAAGTTAAAAGAGAACATGCAGCAGCATCTGAGGTTAATTCGGAGGATAAGGGTAAGAAGGAAGACAAATTGTTGTCAGATAAGGGTATAAAGAGGAGAAGGAGAACGATCCAATTGCAGGAAGAGCGAGGTGAAGAGAATAATGAGGATTCTGTGAAATCAGGATCTAAACGTGTGATAACTGATAGTAGGGGGAGGAAAAAGTCTAATTCTGCTCACAATGGAGAGGGAGATGATTGCTTCTGTTGTCATCAGTGCCAAAAGAGTGACAGGGATGTTGTCCGCTGCCAACAAGACCGATATCAACAAGGCTGCTGCCAAAAACGATACTGTAGACCTTGCCTCGAGAAATGGTATCCACAATTGTCAGAGGAAGAAATAGCCAAATCTTGCCCTGTTTGCCGTAAAAATTGCAACTGCAAGGCCTGCTTGCGGAGAAAAGATGTGCACATGGATTCTGAGAATTCTGGAATGCCATCTGAGACAAATAAAAAGATTCAATATTTGAAGTATTTGATACAGGTTCTCTATCCTTTTTTGGAAAAGTTTGATTATGAACAGCAGTTGGAAAAGGATCTGGAAGCTAAAATTCAAGGGTTGGCAATCTCAAAATTAAAAGTAAAGCAGGCTGGCATTTCCAATGATGAGCGTGTTTATTGCAATAACTGTAGCACTTCTATCATTGATTTTCATCGGACCTGTCCCAAATGTTATTATGATCTATGCCTCAATTGTTGCCGGGAGTTCCGCAACAACTTCTTTCATGTTGCTAGAGATGAGACGTTTGAGGAATGTAATGACAACAAAGAAATTCATCTGCCTGAGAAAGAGCCTGTTTTGTTTGCTGTAATTGAGACAAGATGTCTGCAATCAAATTCTGAGGAAGATGTGAAAGCAAAACATATAATGGAACCAGCAAAAAAGGGCGCTATCCCCTGTCCACCTAAAGAAAAGGGTGGTTGTGGACATAAATATTTGAAACTTAAGAGTATATTTCCTGACAATGAGGTTTCCAAGTTAAAAAAGCAAGTTGAAACTTTAATTGAATTGCACAAACTGAGGGATCTTCCAGGAGTTTCATTTCCTTGCACTTTGTGTTACAATGCTGATGATGTAATTGATGCCAGTAATGACAACGTGCGGAAAGCTGCCTCCCGTGAAGATACTAGTGACAACTGCTTATATTGCCCTTTGGGCAGAGAGATTAAAGAGGTCCATTTGGGCCATTTTCAAAAACATTGGTTGAAGGGAGAGCCAGTAATTGTTAGAAATGTTCTCGAATTAACCCCTGGATTGAGTTGGGAGCCAATGGTAATGTGGCGTGCATTACGTGAGATAACCTACACAGGTGAATCTCAATTGAAAGTGACTGCAATAGATTGTCTTGACTGGTGTGAGGTTGAGATAAATATCCATCAGTTTTTCAAGGGTTACTGTGAGGGTCGGTCTCACATCAGCCATTGGCCTGAGATGCTCAAGCTTAAGGATTGGCCACCATCTAATTTCTTTGAGGAGCGGCTACCTCGTCATGGCGCCGAATTTGTTTGCGCTTTGCCCTACAAGGAATACACTCATCCTCGCTCCGGAATTCTTAATGTTGCTTCAAAGTTGCCAAACGGTTCTCTGAAGCCTGACTTGGGACCAAAGACATATATAGCCTATGGTTATGCAGAAGAGCTTGTACATGGAGATTCTGTGACCAAGCTTCATTGTGACATGGCCGATGCGGTCAATATTTTGACTCATACTGCTGAAGTTGAACCAAGCTCTTATGACATTGCCAAAATAAAGAAATTGAAGAAGGAATATTCTGCTAAAGACGAGAGAGAACTGTTTGGTGTCCAGAGTAATGGTTCTGTGTCAGAGAAATCCTCATCAAAATTGGAAGTAGAGATTGAATCTAATGCACCAAAGGATGCATCTAGCACCGAGGGTGTTACTATCAATGAAGTGTCCGTGTTGGAAAATGATGGCATTAAAGCAGAAAGTCAAAATGCCGTGCCAATTGATGTTGCATCTAGTGCCTCTCACACTAGTAAAGCTCTTGACTTGTCTGACAATAATCATGAAAGTAATTGTTTAAGGGAATTGCCTGCAATTCATGAGTCAACTCCTCTGGTTAGCTTGAAAGTAAAGGAAGGTGTCAAAAATTTCCACGCAGAAAATGAATCTTGTGTGCTAGAAGTGAAACAAAAGAAGGAAGGATGTAGCAGTACCATGGCTATTAGGACGAATGATGCTGAGATGAAGATTGTTGATTATTCATCTTCTGATAGAGAATATGAAGAAGAGCATGACGATGATCATGGAGTAGATAAAATGTTTGCTGTTTCATCATCAGAAAAGGAAGCAGACATTGGTTTAAGGCAACCCACAAAACTGAACGTGAGGATAGACAATGCTAAAAGAAATAGCAAGTTGAAGAAGCAAGAGTTTTGTGCCTCCATGTTGCGGGCAAAAGGGCAAGGTCAAATGAAAAAGGACATAGAGGTGAAGAAGGAGCTTGATGCTGATTTATCTATTGTGCTTACTTCAAGGAGTGATGTGGATAACACTGATGGAAGCATTGTACCTCCAACTCTTAGTTCTATATCTGATTTGGGTGGACCTGAAATGGGTGAGGGAAGTGCAGTCTGGGATATTTTTCGTAGGCAGGATGTTCCCAAACTTGAGGAATACCTTAAAAAGCATTGCAGGGAATTTAGGCATATTCATTTGGATCCAGTGACGCAGGTTGCTCACCCCATTCATGACCAAGTATTCTACCTGACGTCTTATCACAAAAAGAAGCTCAAAAAAGAGTTTGGAGTTGAACCATGGACATTTGTCCAAAAACTTGGTGAGGCAGTATTCATACCTGCTGGATGTCCCCACCAAGTGAGGAATTTGAAGTCGTGTATGAAGGTTGCTCTTGACTTTGTCTCTCCTGAGAATGTTCAAGAGTGCATTCGGTTGACTGAGGAATTTCGCAATCTTCCCCCTAATCACAGAGCAAAGGAGGATAAACTTGGGGTGAAGAAAATGGCTTTTTATGCCTTGGAATCTGCTGCAAGGGAACTGGAGAACCTGACAGGTCTCAAGCCTTGA 3912 0.4182 MAGDEKEKGVRLVPPDELRCTRCDGKTWRCQHWRIHNQSYCEDHYLNMKAMPLKNRKNLNGGESMSGALAVFGTRQRSKRRNPQKDLKLDSFGRRTDTQKVQETGDIEEYKVLDRKKHVISNNVGCSNRALTVLEEDELLPRKKDRRTTNSFSCITSRALTNNTQKDQEISETEEDDVVPQKKDGTSKNVSSSTNRCCDDANRGSDSINAGSFLNGEILFNRKYGKGTKRAREAFEDKKEGEIDVEKKTRSVNIEDSVGEETKRSKSDLLVYRRREVKREHAAASEVNSEDKGKKEDKLLSDKGIKRRRRTIQLQEERGEENNEDSVKSGSKRVITDSRGRKKSNSAHNGEGDDCFCCHQCQKSDRDVVRCQQDRYQQGCCQKRYCRPCLEKWYPQLSEEEIAKSCPVCRKNCNCKACLRRKDVHMDSENSGMPSETNKKIQYLKYLIQVLYPFLEKFDYEQQLEKDLEAKIQGLAISKLKVKQAGISNDERVYCNNCSTSIIDFHRTCPKCYYDLCLNCCREFRNNFFHVARDETFEECNDNKEIHLPEKEPVLFAVIETRCLQSNSEEDVKAKHIMEPAKKGAIPCPPKEKGGCGHKYLKLKSIFPDNEVSKLKKQVETLIELHKLRDLPGVSFPCTLCYNADDVIDASNDNVRKAASREDTSDNCLYCPLGREIKEVHLGHFQKHWLKGEPVIVRNVLELTPGLSWEPMVMWRALREITYTGESQLKVTAIDCLDWCEVEINIHQFFKGYCEGRSHISHWPEMLKLKDWPPSNFFEERLPRHGAEFVCALPYKEYTHPRSGILNVASKLPNGSLKPDLGPKTYIAYGYAEELVHGDSVTKLHCDMADAVNILTHTAEVEPSSYDIAKIKKLKKEYSAKDERELFGVQSNGSVSEKSSSKLEVEIESNAPKDASSTEGVTINEVSVLENDGIKAESQNAVPIDVASSASHTSKALDLSDNNHESNCLRELPAIHESTPLVSLKVKEGVKNFHAENESCVLEVKQKKEGCSSTMAIRTNDAEMKIVDYSSSDREYEEEHDDDHGVDKMFAVSSSEKEADIGLRQPTKLNVRIDNAKRNSKLKKQEFCASMLRAKGQGQMKKDIEVKKELDADLSIVLTSRSDVDNTDGSIVPPTLSSISDLGGPEMGEGSAVWDIFRRQDVPKLEEYLKKHCREFRHIHLDPVTQVAHPIHDQVFYLTSYHKKKLKKEFGVEPWTFVQKLGEAVFIPAGCPHQVRNLKSCMKVALDFVSPENVQECIRLTEEFRNLPPNHRAKEDKLGVKKMAFYALESAARELENLTGLKP* 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00724 1303 SMART cupin_9 782 1265 IPR003347 -
Pte16g00724 1303 MobiDBLite consensus disorder prediction 279 350 - -
Pte16g00724 1303 ProSiteProfiles JmjC domain profile. 801 1265 IPR003347 -
Pte16g00724 1303 Pfam JmjC domain, hydroxylase 1147 1248 IPR003347 -
Pte16g00724 1303 ProSiteProfiles WRC domain profile. 14 60 IPR014977 -
Pte16g00724 1303 SUPERFAMILY Clavaminate synthase-like 684 1297 - -
Pte16g00724 1303 ProSiteProfiles Zinc finger RING-type profile. 358 410 IPR001841 -
Pte16g00724 1303 MobiDBLite consensus disorder prediction 184 202 - -
Pte16g00724 1303 MobiDBLite consensus disorder prediction 890 919 - -
Pte16g00724 1303 MobiDBLite consensus disorder prediction 159 202 - -
Pte16g00724 1303 MobiDBLite consensus disorder prediction 71 97 - -
Pte16g00724 1303 Pfam WRC 15 48 IPR014977 -
Pte16g00724 1303 MobiDBLite consensus disorder prediction 279 349 - -
Pte16g00724 1303 FunFam Transcription factor jumonji (JmjC) domain-containing protein 1081 1274 - -
Pte16g00724 1303 MobiDBLite consensus disorder prediction 79 97 - -
Pte16g00724 1303 Gene3D Cupin 665 917 - -
Pte16g00724 1303 Gene3D Cupin 1069 1274 - -
Pte16g00724 1303 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 1299 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00724 Pte-Chr16 24102493 24116373 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pte16g00724 JmjC 2.2e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00724 K15601 - qsa:O6P43_020493 1028.08