Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00717 ATGGATCTACAATATTTTGAGGCTAAGGTTTTCATGGCCATTACATTGGTCTTTCTTTCTGGATTTGTATTTTGGTTGTGTGATGCGCTGATAGTGAAGCCAAAAAGACTGAGATTTTTTCTAAGGAAGCAAGGGATTATTGGACCCCCACCTGTTTTTCTCTTGGGAAACATCTTGGAGATAAAGAGAGCCCTGAAAAAATCAACTACCACAACAAGTGCTGCTGCTTCAAATGAAGTTCCTGTCTCTCACGATGCTGCTTCTCTTCTCTTCCCCTTCTTTGAGAAATGGAGAAAACAATATGGTCAAATATATGTCTTTTCTCTGGGAAACACACAAATATTGCATTTGACTCACCCTGATGTGGTGAAAGATGTAACAACTTGCACATCCCTAGACCTGGGGAAGCCCTCGTATCAGCAAAAAGAACGTGGCCCTTTGCTAGGTCAAGGTATTTTGACGTCTAATGGCACTGTATGGGCACATCAAAGAAAAGTCCTTGCTCCTGAGTTATACATGGATAAGGTTAAGGGGATGGTAAACTTAATCACAGAATCTTCTACTAACGTAGTAAACTCCTGGAAGAGCAAGGTTGTTGAGACAGAAAGTGGAACAGCAGAAATCAAAATAGATGAGTACATGAGGAGTTTCTCTGGGGATGTTATTTCAAGAGCCTGTTTTGGAAGCAACTACTCCAAAGGGGAAGAGATTTTCTTAAAACTAAGGTCACTGCAGGAAATCATGTCCAGAAAAAGCTTGTCAACTGGGATTCCTGGAATGAGATATCTTCCTACGAAGACCAATAGAGAAGCATGGACATTAGAAAAGGAAGTGAGGAATTTGATACTAGAGGTTGTGAAGGAAAGACAAGAAACTGGAGAAGATGAGAAGGACTTGTTGCAGATGGTTCTTGAAGGCGCTAAGAACAGTGATACCGGTCAAGAGGCAACAGACCGCTTTATTGTTGATAACTGCAAGAACATATACCTAGCTGGGTATGAGACCACTGCTGTTGCTGCTACATGGTGTCTCATGCTGTTAGCTTCGAACCAAGGGTGGCAAGATATTGTGCGTGCTGAGGTCCTACGAGTTTGTGGTGGTCAAATTCCTAACAATGATATGCTTCGAAAATTGAAGAAGCTGACAATGGTAATTCACGAGTCTTTGCGCCTATATCCACCAGTACCTGTGGTATCGAGAGAGGCCTTGAAGGACATAAATCTCCGGAAGATTCATATCCCAAAGGGTACAAACGTTTGGTCCATGGTAATGACATTACATACTGATCCAGAAATATGGGGAGATGATGCCTACAAATTCAACCCTGAAAGATTTGCAAATGGTGTCACAGGCGCATGTAAGCTTCCACATGTGTACATGCCATTTGGGATTGGTCCAAGAGTTTGCCTTGGACAGAATTTGGCAATGGTCGAACTGAAGATTCTGATTGCACTCATTGTGTCTGAGTTTGCTTTCACCCTCTCCCCTAATTACAAGCACTCACCTGCTCTTAGATTGGTTATAGAACCTCAGGATGGAGTTGACTTGTTGGTGAGGAAACTATAA 1566 0.4227 MDLQYFEAKVFMAITLVFLSGFVFWLCDALIVKPKRLRFFLRKQGIIGPPPVFLLGNILEIKRALKKSTTTTSAAASNEVPVSHDAASLLFPFFEKWRKQYGQIYVFSLGNTQILHLTHPDVVKDVTTCTSLDLGKPSYQQKERGPLLGQGILTSNGTVWAHQRKVLAPELYMDKVKGMVNLITESSTNVVNSWKSKVVETESGTAEIKIDEYMRSFSGDVISRACFGSNYSKGEEIFLKLRSLQEIMSRKSLSTGIPGMRYLPTKTNREAWTLEKEVRNLILEVVKERQETGEDEKDLLQMVLEGAKNSDTGQEATDRFIVDNCKNIYLAGYETTAVAATWCLMLLASNQGWQDIVRAEVLRVCGGQIPNNDMLRKLKKLTMVIHESLRLYPPVPVVSREALKDINLRKIHIPKGTNVWSMVMTLHTDPEIWGDDAYKFNPERFANGVTGACKLPHVYMPFGIGPRVCLGQNLAMVELKILIALIVSEFAFTLSPNYKHSPALRLVIEPQDGVDLLVRKL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00717 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Pte16g00717 521 SUPERFAMILY Cytochrome P450 87 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 Gene3D Cytochrome P450 34 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 Pfam Cytochrome P450 91 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00717 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 28 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00717 Pte-Chr16 23694710 23697334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00717 122 514 Cytochrome P450 AT5G24900 46.402 9.71e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00717 K24544 - jre:108989179 788.489