Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00710 ATGAGGACAGATGAGCAGAAACTTCTCATTGAAAATGCCAAACTTAAAGCTAAGGTAGAGAGACTCCGAGCAGCTCTATTAAAGTATCCCCAAGCAATTGCATCACCTTCATGCTCTTCTGGAAATGACCAAGAGAATAAAAGCTCCTTGGATTTTTACAATGGAATTTTTGGACTGGAGAATACAAAGATAATAGAGCTAGCTAACCAAGCGGTGGAGGAGCTCGTAAAGATGGCTACTGCTGCGAAACCATTGTGCGTTCGAAGTGTTGAAACTGGCCGTGAAATAATGAACTATGATGAGTACAAGAAAGAGTTCACCATTGCTGATCTCAAAGGTGGCAAGGTTGGCTTAGGACTTTCTTTTGTCATGGACATCCCTTAA 384 0.4167 MRTDEQKLLIENAKLKAKVERLRAALLKYPQAIASPSCSSGNDQENKSSLDFYNGIFGLENTKIIELANQAVEELVKMATAAKPLCVRSVETGREIMNYDEYKKEFTIADLKGGKVGLGLSFVMDIP* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00710 127 Coils Coil 5 25 - -
Pte16g00710 127 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 108 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00710 Pte-Chr16 23504004 23504387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00710 8 109 Homeobox Transcription Factor Family AT1G79840 55.340 4.33e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00710 K09338 - mnt:21408879 160.999