Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00700 ATGAAGTGCTTGGACGAAAAAGTCCCGATCTTGAACACTTCCCCAGATAGGGTTGTAGCTTACAGGCGGATGCTGCAGCAAGCAAGTACTTCAAATCCACCCACTAGTGCGAGCAATCAATATAATGCAATTGTCATTACTACACCATCACCTTCCCCTTCACGCCCGGAGTTGTCACAGTCCTCACAAGCACCATTACCAGATTCTTCATCACCGGATTCTTCACCGCCTTCATCGCCAGATCCTTTGCCTTCATATCAATCATTTTCTCCTTCTTCACCACCAGAATCTACCTCAACACCATTAAGTTCTCCAACAAATTCAAACCCAGAAACTGCAGAAGCACCTATACGTCCATCGTCTCCTTCCAGTCTTTCGTCACCTCCTTTGGTTGATCAAGGCATATCACACCCAGAAAGCACTCCAACTCCTGCATTTCTGCCTAAATATTCTCATAGGGTGCCAATGAGAGCTCCTCCCTTTTTACCAAGCCAGACTTCTACTTCCATTTTCCCAAGCCAAACTTATAACCAAATTTCTAATCCAAAGCATAATAGTAGGATCAAAATTGGGTCAATAGTTGGGGGTGTCTCTCTATTTGCTCTGATTTCAGCCATTGGTGTTGTTTTCTTAAGGAAAACTAAAGTTGTGACTGTAAAACCTTTGGCCACTGGTATCAGTGGGCAACTTCGAAAGGCACTTGTAGCAGGTGTACCAGGTCTCAAAAGGGGAGAACTGGAAGCTGCTTGCGAAGAATTCAGTAACATCATTATTTCTTTCCCTGGTGGTACAGCTTATAAAGGAACTCTATCGAGTGGGGTGGAAATAGCTGTGATATCCATTTCAGTCAGCAGTTCAAAGAAGTGGTCAAAATCTATGGAATACCAGTTTAGGAAGAAGATTGAAACATTGTCCAAAGTGAACCACAAGAATTTTGTCAATCTTATTGGCTATTGTGAAGAGGAAGAGCCGTTCACAAGGATGATGGTTTTTGAGTATGCGCCAAATGGGACCCTTTTTGAGCATCTTCATAAAGAGGTTGAGGATCATCACATGGAAGAACTGGAGCCTTTGGATTGGAAAACAAGAGTAAGAATAGCAATGGGGATGGCATATTGTCTGGAGCACATGCATCAGCTTACACCAGTTATGACCCATACAAGCTTGCTATCTTACTCCATATACCTCACTGAAGATTATGCATGTAAATTAGCAGATTTTAGTTTCTTCACTGACATAATTGATGCTCCGGAGGGTGCAGCACTATCAACGCCGTCAGTTGATCCGACAAGCAATGTCTTCAGCTTTGGGATTATCTTATTTGAAATGTTAACAGGAAAATTCCCATACTCGTCAGGCTACCTTACAACTTGGGCATCAAGTAGATTAATGGGGGAGGAACCAATCTTAGAGTCACTGGATCCATCTCTGGGACTGGGAGGCTTTCAGACAGAGGAGATTCTGAAAATCTTTAAAGTGATACAAAATTGTGTACTCACACAGCCACAAGAAAGGCCAGCAATGTCTGAGGTTACTGCTTGGTTGAAGGAGATTACTAACATGGAACCTCATGCAGTGATTCCAAAATCATCAGGTCTTTGGTGGGCAGAACTAGAATTAGCCGAATATGAAGTTGAGTATTTGAGTTAA 1650 0.4267 MKCLDEKVPILNTSPDRVVAYRRMLQQASTSNPPTSASNQYNAIVITTPSPSPSRPELSQSSQAPLPDSSSPDSSPPSSPDPLPSYQSFSPSSPPESTSTPLSSPTNSNPETAEAPIRPSSPSSLSSPPLVDQGISHPESTPTPAFLPKYSHRVPMRAPPFLPSQTSTSIFPSQTYNQISNPKHNSRIKIGSIVGGVSLFALISAIGVVFLRKTKVVTVKPLATGISGQLRKALVAGVPGLKRGELEAACEEFSNIIISFPGGTAYKGTLSSGVEIAVISISVSSSKKWSKSMEYQFRKKIETLSKVNHKNFVNLIGYCEEEEPFTRMMVFEYAPNGTLFEHLHKEVEDHHMEELEPLDWKTRVRIAMGMAYCLEHMHQLTPVMTHTSLLSYSIYLTEDYACKLADFSFFTDIIDAPEGAALSTPSVDPTSNVFSFGIILFEMLTGKFPYSSGYLTTWASSRLMGEEPILESLDPSLGLGGFQTEEILKIFKVIQNCVLTQPQERPAMSEVTAWLKEITNMEPHAVIPKSSGLWWAELELAEYEVEYLS* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00700 549 MobiDBLite consensus disorder prediction 90 140 - -
Pte16g00700 549 MobiDBLite consensus disorder prediction 24 69 - -
Pte16g00700 549 PANTHER PROTEIN MALE DISCOVERER 2 54 541 - -
Pte16g00700 549 MobiDBLite consensus disorder prediction 24 147 - -
Pte16g00700 549 SUPERFAMILY Protein kinase-like (PK-like) 263 515 IPR011009 -
Pte16g00700 549 Gene3D Phosphorylase Kinase; domain 1 229 333 - -
Pte16g00700 549 Gene3D Transferase(Phosphotransferase) domain 1 334 529 - -
Pte16g00700 549 Pfam Protein tyrosine and serine/threonine kinase 265 512 IPR001245 GO:0004672|GO:0006468
Pte16g00700 549 MobiDBLite consensus disorder prediction 70 89 - -
Pte16g00700 549 FunFam Inactive receptor-like serine/threonine-protein kinase 225 333 - -
Pte16g00700 549 ProSiteProfiles Protein kinase domain profile. 216 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00700 Pte-Chr16 22791668 22794147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00700 11 522 Receptor kinase-like Gene Family AT1G67720 26.252 1.78e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pte16g00700 PK_Tyr_Ser-Thr 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00700 - - cave:132163347 416.001