Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00678 ATGGCATCGTCAACAGAGACCTACAGTAACGGTGGAGATGAGTGTCTGAACCTCTGCAAGAACAGTGACGTTGTTCATGACCCATTGAACTGGGGTAGGGTTGCAGAGTCATTGAAAGGCAGTCACCTTGATGAGGTGAAACGCATGGTTGAAGAGTACAGGAAGCCAGTGGTGAAGCTTGGTGGTGAAAGCTTGACCATATCCCAAGTGGCTGCCATTGCCCTCCATGATGGAGGGGTCAAGGTTGAGCTCTCAGAGGAGGCTCGAGCTAGTGTCAAGGCCAGCAGTGACTGGGTCATGGAGAGCATGAACAAAGGGACTGACAGTGTCACCGCTGGCTTTGGTTCAAACTCACGCAGGAGAACCAACCAGGGTGGTGCTTTGCAGAAGGAGCTGATTAGATTCTTGAATGCTGGTGTCTGCGGAAATGTGACAGATACGAGTCACACTCTGCCTCACACAGCCACAAGGGCAGCCATGTTGGTCAGAATCAACACACTTCTTCAGGGATACTCTGGCATCAGATTTGAGATCTTAGAAGCTTTATCCAAGTTTCTCAACAATAACATAACTCCATGTCTGCCATTAAGAGGTACAATCACTGCCTCTGGCGACTTGGTTCCTCTATCCTACATTGCTGGTCTCTTAATTGGTAGGCCTAATTCCAAATCGGTTGGACCAAATGGACAGAAGCTCAGCGCCACAGAAGCTTTTCAACTGGCAGGACTTGGTGGTGCTTTTTTTGAATTGCAACCGAAGGAGGGGTTGGCACTAGTGAATGGCACTGCAGTTGGTTCTGGCTTGGCTTCTATGGTTCTTTTTGAGACCAATATACTAACTGTTCTATCAGAAATTATCTCAGCAATTTTTGGCCAAGCCATGCAAGGGAAACCAGAATTTACAGATCACTTGATACACAAACTGAAACATCATCCCGGCCAAATTGAAGCAGCAGCTATAATGGAACATATTTTGGATGGAAGCTCTTACATGAAGGCAGCAAATAAATTGCATGAGGTAGATCCTTTACAGAAGCCTAAACAAAATAGATATGCTCTCACAACTTCTCCTCAATGGCTAGGACCCCAGATTGAAGTGATCCGGGCCGCGACGAAAATGATGGAAAGGGAGATCAACTCTTTCAATGATAACCCCTTGATTGATGTTTCAAGGAACAAGGCTATTCATGGAGGAAACTTCCAAGGAACCCCAATTGGAGTTTCTATGGATAACACACGTTTAGCCATTGCTTCTATTGGCAAACTCTTGTTTGCTCAATTCTCGGAGCTTGTCAATCACTTATACAGCAATGGACTGCCTTCCAATCTTTCTGGAGGTTCCAATCCAAGCTTGGATTGTGGATTTAAGGGTGCTGAGATTGCAATGGCAGCATACTGCTCAGAACTCCAATTCCTCGCCAATCCTGTCATCAACCATGTCCAAAGTGCTGAACAACACAACCAAGATGTCAACTCCTTAGGCTTGATTTCCTCAAGGAAAACAGCTGAAGCCGTAGACATACTGAAGCTCATGGCTTCTACATTCTTGGTTGCTTTGTGCCAAGCCATCGATCTAAGGCATCTGGAGGAGAATTTGAAGAATACTGTCAAGAACACAGTCAGTCAAGTTGCTAAGAAGGTTTTGACTATGGGAGTGAATGGCGAGCTCCATCCCTCGACTTTCTGTGAGAAGGACTTGCTCAAAGTGGTTGACGGTGAATATGTCTTTGCTTACATTGATGACCCCTGCAGTGCAACCTATTCTTTGATGCAGAAGCTTAGACAAGTGCTAGTTGATCATGCTTTGGAAAATGGTGAAAAGGAAAAGAATGCAAACACTTCTATTTATCTAAAGATAGTAGCTTTTGAAGAAGAACTCGAGACACTTTTGCCTAAAGAAGTTGAGAGTGCAAGGGCTGAAATTGAAAATGGGAATGCTGCGATTCCTAATAAGATCAAGGAATGCAGGTCTTACCCCTTGTACAGATTTATCAGGGAGGAACTTGGGACATCTTTGCTGACAGGTGAGAAAATCCGATCACCTGGTGAAGATTGTGACAAGGTTTTCTCTGCAATGACTGCTGGGAAATTAATTGATCCAATTCTGGAATGTGTGAAGGAGTGGAATAGTGCTCCGTTACCTATATGTGTGGCTGGTGTCATCAACTAA 2169 0.4486 MASSTETYSNGGDECLNLCKNSDVVHDPLNWGRVAESLKGSHLDEVKRMVEEYRKPVVKLGGESLTISQVAAIALHDGGVKVELSEEARASVKASSDWVMESMNKGTDSVTAGFGSNSRRRTNQGGALQKELIRFLNAGVCGNVTDTSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEALSKFLNNNITPCLPLRGTITASGDLVPLSYIAGLLIGRPNSKSVGPNGQKLSATEAFQLAGLGGAFFELQPKEGLALVNGTAVGSGLASMVLFETNILTVLSEIISAIFGQAMQGKPEFTDHLIHKLKHHPGQIEAAAIMEHILDGSSYMKAANKLHEVDPLQKPKQNRYALTTSPQWLGPQIEVIRAATKMMEREINSFNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIASIGKLLFAQFSELVNHLYSNGLPSNLSGGSNPSLDCGFKGAEIAMAAYCSELQFLANPVINHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMASTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKKVLTMGVNGELHPSTFCEKDLLKVVDGEYVFAYIDDPCSATYSLMQKLRQVLVDHALENGEKEKNANTSIYLKIVAFEEELETLLPKEVESARAEIENGNAAIPNKIKECRSYPLYRFIREELGTSLLTGEKIRSPGEDCDKVFSAMTAGKLIDPILECVKEWNSAPLPICVAGVIN* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00678 722 PANTHER HISTIDINE AMMONIA-LYASE 23 716 IPR001106 -
Pte16g00678 722 Gene3D - 19 262 IPR024083 -
Pte16g00678 722 Pfam Aromatic amino acid lyase 65 539 IPR001106 -
Pte16g00678 722 Gene3D - 529 650 IPR023144 -
Pte16g00678 722 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841
Pte16g00678 722 NCBIfam phenylalanine ammonia-lyase 27 706 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pte16g00678 722 Gene3D Fumarase/aspartase (Central domain) 263 710 - -
Pte16g00678 722 FunFam Phenylalanine ammonia-lyase 18 262 - -
Pte16g00678 722 FunFam Phenylalanine ammonia-lyase 529 650 - -
Pte16g00678 722 SUPERFAMILY L-aspartase-like 27 716 IPR008948 GO:0003824
Pte16g00678 722 CDD PAL-HAL 63 526 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00678 Pte-Chr16 21251849 21255616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00678 9 716 Monolignol Biosynthesis Gene Families AT2G37040 78.522 0.0 1171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00678 K10775 - qsa:O6P43_008636 1166.76