Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00661 ATGGCAGTTGACAGAGCCATGTTTTCATTACACAAGAAGGAAGTTATGCTTGTCAAGCCCTCAAAACCCACACCATCAACTATTCTTTCTTTGTCGACAATCGACAATGACCTTAACCTCGACCTCCTTTGTCAAACAATTTACGTGTTCAAAGGTAATATAGCTTCTGGTGATAATGGTCATGACCTAACATCAGCAAAGATGAGCAGGCAATTAGACCCGGCTAGTGTGTTAAGAGAAGCTCTCTCCAAAGCTTTGCTTTATTATTACCCTCTTGGCGGTAAGCTTAGAAAGGATACCATTGACGGAAGGCTTCAAATTGATTGTAAAGATGTTGCGGTGCCATTCTTAGAGGCAATCGCAACCTGTGAACTATCTGCTGTACGCTATCTAGATGGGGTTGCCATTGAAACAGCAGAGCAGTTTGTGTTTGATTTTCCAACTGGCGATAGCAGCGTCAGTCACCCTTTGGTGGTTCAGGTGACAAAATTTGCATGCGGGGGTTTCACAATTGGTATAGGCCTCTCACATTCAGTTTGTGATGGATATGGGGCAGCTCAGTTCTTCAGAGCCATGACTGAACTTGCAAGCGGAAGGGATGAGCCTACAGTAAAACCAGTGTGGGAGAGGGAGAGACTACAGGGAAAGCTCTTGAAGGAACCAATTCCACCTCTCATCAACAGAGGAGACGCTGCTGTCTCACCATATCTGCCAACTACAGACCTTTCGCATGAGATCTTCTACATAGATATTGACAGCATAAGAAGACTCAAACTCAGTCTAATGAAAGAAAATGATCAATGTCCAAGTACAAGACAAGAAAGCTTCACAACTGTTGAAGCACTTGGTGCCTATGTGTGGAGATCAAGAACAAAAGCTTTGAAATTGAACTATGATGGCAAAACTATATTTCTTCTAACAATGGGGATAAGGCACTTGTTCAATCCACCATTGCCTGAAGGGTATTATGGTAATGCTTTTGTTGGTTCACAAGTTGTGGTCACAGTAAGAGACCTAATTGAAGGACCACTCTCAGAGGCTGCAAAGCTCATTAAGGAAAGCAAGAAGATGGTTTCTCAAGGTGGATATATTGAGAACTCACTTGATATGTTAGAATCTTTAAGACAAAAGAACACCAAAGCTGAAGCTAGTGGTGCATCAATGATATTGACAGAATGGAGACAGCTAGGGTTGCTGGAAGAAGTAGATTTTGGATGGAAGCAGTCAGTGAATGTCATACCAGTTCCATGGAACATGTTTGGTTACGTGGATTTATGCATTTTCTTGCCTCCAACCAAGTTGGATCCTTTCATGAAAGGTGGAGTTAGAGTGCTTCATTCCCTTCCAAAAGCTGCCTTCCCTATTTTCAAGGAAGAGATGGAAAAACTCAAGCTTGGAGGCTACATCAACGCTTGA 1416 0.4266 MAVDRAMFSLHKKEVMLVKPSKPTPSTILSLSTIDNDLNLDLLCQTIYVFKGNIASGDNGHDLTSAKMSRQLDPASVLREALSKALLYYYPLGGKLRKDTIDGRLQIDCKDVAVPFLEAIATCELSAVRYLDGVAIETAEQFVFDFPTGDSSVSHPLVVQVTKFACGGFTIGIGLSHSVCDGYGAAQFFRAMTELASGRDEPTVKPVWERERLQGKLLKEPIPPLINRGDAAVSPYLPTTDLSHEIFYIDIDSIRRLKLSLMKENDQCPSTRQESFTTVEALGAYVWRSRTKALKLNYDGKTIFLLTMGIRHLFNPPLPEGYYGNAFVGSQVVVTVRDLIEGPLSEAAKLIKESKKMVSQGGYIENSLDMLESLRQKNTKAEASGASMILTEWRQLGLLEEVDFGWKQSVNVIPVPWNMFGYVDLCIFLPPTKLDPFMKGGVRVLHSLPKAAFPIFKEEMEKLKLGGYINA* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00661 471 PANTHER ACYL TRANSFERASE 4 7 463 - -
Pte16g00661 471 Pfam Transferase family 12 462 - -
Pte16g00661 471 Coils Coil 364 384 - -
Pte16g00661 471 Gene3D - 6 221 IPR023213 -
Pte16g00661 471 Gene3D - 237 460 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00661 Pte-Chr16 19454615 19456249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00661 13 423 Monolignol Biosynthesis Gene Families AT5G48930 26.807 2.91e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00661 K20240 - cpap:110823889 569.696