Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00642 ATGGCTAAAGGACAGCCTCTAGTGCCTGCATTGCTCATATTTGGGGATTCAGTTGTTGATGCTGGCAATAACAACAATCTGTACACCATTATAAAAGCAAATTTTCCTCCTTATGGAAGGGACTTCGTCAATCATCAACCAACTGGGCGGTTCTGCAATGGAAAGCTTGCCACAGATTTCACTGCTGAGAATCTTGGCTTTACTTCATATCCACCTGCTTATCTCAGTGGACAAGCCAAGCGGAAGAAACTACTAACTGGCGCAAACTTTGCCTCTGCTGCTTCTGGTTACTATGAAGCTACCGCAAATCTTTATCATGCAATTCCATTGAGTCAGCAGTTGGAGTACTACAAAGAGTACCAGAATAAAATATCGCAAACGTCAGGAAAATCAAATGCTTCCTCTATTATATCTGGAGCTATACACCTGGTTAGCGCTGGAAATAGTGATTTTATTCAGAATTACTACGTAAATCCTTTGCTCTACAAGGCCTATACCCCTGATCAGTTTTCGGACATTCTCATGCAGTGTTACTCCAGTTTCATTCAGATGTCTGGCCAGCAGTCATCGCCTAGCATCCTTGATCCAGATGTTGCACAAACCAAGGGTAGGAGAAGAAATTCACTAAATCGAGCAACCATAATACGAAGTGGACTTGAAATATCTTCAGATACTTCTGTAAAGTGCTCACTGTTTTTCAAAAATGGCCATAATAGATGGATTATCCTAAAGCTTGCTCCCAAGGTGGACAATGGACCTAGATGCCTCGGTACAACCCGGTGGTTCCAGTTTCCACGTCCCTTCCCTTACTAA 813 0.4268 MAKGQPLVPALLIFGDSVVDAGNNNNLYTIIKANFPPYGRDFVNHQPTGRFCNGKLATDFTAENLGFTSYPPAYLSGQAKRKKLLTGANFASAASGYYEATANLYHAIPLSQQLEYYKEYQNKISQTSGKSNASSIISGAIHLVSAGNSDFIQNYYVNPLLYKAYTPDQFSDILMQCYSSFIQMSGQQSSPSILDPDVAQTKGRRRNSLNRATIIRSGLEISSDTSVKCSLFFKNGHNRWIILKLAPKVDNGPRCLGTTRWFQFPRPFPY* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00642 270 Gene3D SGNH hydrolase 2 195 IPR036514 -
Pte16g00642 270 PANTHER GDSL ESTERASE/LIPASE EXL3 8 186 - -
Pte16g00642 270 Pfam GDSL-like Lipase/Acylhydrolase 12 174 IPR001087 GO:0016788
Pte16g00642 270 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 11 22 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00642 Pte-Chr16 18555723 18582624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00642 9 183 Pollen Coat Proteome AT1G75910 39.773 1.18e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00642 - - tcc:18590425 310.071