Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00638 ATGAGTCGTGGAATAGCAACGGGTACAAAGGGAAAGAAGAAGGGAGCGTCGTTCGTGATCGACTGCTCGAAACCTGTGGAGGATAAGATCATGGACATCACCTCACTGGAGAAGTTCCTTCAGGAAAGGATCAAGGTAGGTGGGAAAGCCGGTAACTTGGGTGATGCCGTCACTATAGGGAGAAGAACAAGATCACTGTAA 201 0.4876 MSRGIATGTKGKKKGASFVIDCSKPVEDKIMDITSLEKFLQERIKVGGKAGNLGDAVTIGRRTRSL* 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00638 66 Gene3D - 5 66 IPR038526 -
Pte16g00638 66 PANTHER 60S RIBOSOMAL PROTEIN L22 6 63 IPR002671 GO:0003735|GO:0005840|GO:0006412
Pte16g00638 66 Pfam Ribosomal L22e protein family 14 63 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00638 Pte-Chr16 18397621 18397821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00638 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 80.328 1.15e-28 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00638 K02891 - pop:7455994 100.523