Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00637 ATGGAGTCTACAATTTGCATGAATGATTCTTGTGGAGCGACTGTGACTCATGATTGGAAGAAAGGTTGGCCTCTGCGATCCGGTGGATTTGCTCATCTCTGCTTTAATTGCGGATCTGCCTTTGAAAACTCAATTTTTTGTGATAAATTCCATCTTGAAGAAACTGGTTGGAGAGAATGCCATTTCTGTAAGAAGCGTGTCCATTGTGGATGCATAACATCTAAGACATTGTTTGAGCACCTTGATTATGGGGGAATAAGCTGTATTAACTGTCTGAAGGTTACCCAACTTCATTTGTTTCAGAATGCCGAAACTCCAACCAGGTTCGGTATGCAAACAAAAAATCACGTCAGTGAATCAGAAACGACTATTGTTGGGAAGAGTTTAATTATGGATAACGGTGATGAAGAGAAGCTCATACAGTTGTGCAGAGTTATGGAAGCTAATGAATCCAATCTCCAACTTCAAACTCAGAGAGATGAGATTGATGCTTTTAGTGGGAAAAATGATCCTAAATTTATCTGTCAATTTGGAAAGATGGGGACAGGATTGCCAAATGTTATTGAGCCACCTTTTCAACCAGTGGCACTTGCTAAGCTAGAAGAAGGTAACTGTGGACCACTTTTGGAGAACAAGGACATGCCGGAATCACTTGCTCAGCCATCTCTCTGTATGTCCTTGGGAACTCCATCTGGGAATTCCTTGCTGCCTTTCACCAGTGTGGTTGTGGAAGGCAGGGAGCAAGTGAAAGCATCTTCATTTTCTCTGTCCCAAAGAGTTCGTACAATATTGCCCAAGCCTCTGAAGAAAAGTCTATCCATGAATTCAGAGACAAACAAAACCTCAAATTCTCAGTTGCGTATTGCTCGGCCTCCTGCTGATGTACGGGGGAAGAATCAATTACTTCCTCGATACTGGCCCAGAATTACTGACCAAGAGCTGGAGCAATTGTCCGGAAATTTGAATTCCACTGTCATCCCATTATTTGAGAAGCAGCTAAGTGCCAGCGATGCTGGTAGAATTGGCCGTTTGGTTCTCCCAAAAGCTTGTGCTGAAGCATATTTTCCTCCTATCAATCAATCAGATGGTATTCCTTTGAAAATGCAAGACGTGAAAGGAAATGAATGGACATTTCAATTCAGATTTTGGCCTAACAACAACAGCAGGATGTATGTTTTGGAGGGCGTAACTCCTTGCATCCAGTCTATGCAGTTAAAAGCTGGTGATACTGTAACATTTAGCCATATAGATCCTGGAGGGACACTTGTCATGGGTTTTCGGAAGTCATCAAGCTCCACGGACACCCAGGATGCATCTGCATCTGCATCTGCCATTTCCAATGGCCTATCTCCTAGTAGAACCATCTTTGGTGAGAATGAGTATAATCCATCTGCAAAGGACGCTGATTTTCTTCCAGAAATGAAAGGAAGCAAGGTGCCTGACATCAGTCGTCGATCAGAAAATATTTATGCAGCTAATGGGGATCTTGGCCTGTCTGGAAGTGACAATCACAGAGACATGAACATTAATGGCTTAATAAAGCAATCCATAGCAGTTTCAGAAAAGAGAAGAACCAGGAATATTGGTCCAAAAAGTAAGCGTTTGCTTATCCACAGCGAAGATGCACAGGAGCTAAAACTTACTTGGGATGAAGCACTGGACTTGCTTCGTCCACCACCAAGTGCCAAACCTAGCTTTGTGACCATTGAGGACCACGTTTTTGAAGAATATGATGAACCCCCCGTATTTGGGAAGAGGACAATATTCACAGCTCGTCCATCTGGGGAGCAAGATCAATGGGCTCAATGCGATGACTGCTCCAAATGGCGGAGGCTGCCAGTGGATATTCTTCTTCCTCTAAAGTGGACGTGTTCTGATCATGCTTGGGATACATGCAGGTCTACTTGTTCAGTACCGGAGGAATTGACACCCAAAGAATTGGACATATTTCCAAGAACCACTGGAGATTCTAAAAAGCGAAGAACAGTAGAAAGTAACGGATACACCAAAGAACATGAGCCTACCGGCTTAGATGCTCTAGCAAGTGCTGCAGTAATGGGGGGAAATGTAGGTGATAGAGGCGAACCATCAGGTGGAGCCACCACGAAACATCCGCGGCACCGTCCTGGCTGCACCTGCATTGTGTGCATACAACCACCAAGTGGCAAGGGCAAGCACAAGCCATCGTGTACTTGCAATGTGTGCTTAACTGTGAAGCGCAGATTTAAGACACTAATGCTGCGAAAGAAGAAGCGCCAATCGGAACGCGAAGCTGAAGCGGCTCAGAAGGAGAATAATCATCAGGAAGATGACAGAAAATCAAATACCTGTGTTGAAGAGGCATCTTTGCATACACTCGATTCCAGGAAGCAAGATATCCCGAACAGAATTCAACAACCTGATGTTGGGGAGGCTTGTGCAGGAGAACTAGACTTGAATTATCATCCGATCCGTGAAGAGAATCAATCAGAAATGATACATCTACTTAAGATGATGAGCCGAATTGAGACATACTGCCATCACATTGATGACAATAAACAGCCAAATGGTTCAACAAGTTATCCATCAAACCAGGAGGGCAGTGTAGAACCCAGTTTGCTTCCGGAGTCTACAGCTGGCAAAGGTACCAAAGATGTGCATGATGAATTTCTATTCTCTCGCAACTGGGAAAGAAGTATTCAGTTCAGACAGAAAAAATGA 2700 0.4389 MESTICMNDSCGATVTHDWKKGWPLRSGGFAHLCFNCGSAFENSIFCDKFHLEETGWRECHFCKKRVHCGCITSKTLFEHLDYGGISCINCLKVTQLHLFQNAETPTRFGMQTKNHVSESETTIVGKSLIMDNGDEEKLIQLCRVMEANESNLQLQTQRDEIDAFSGKNDPKFICQFGKMGTGLPNVIEPPFQPVALAKLEEGNCGPLLENKDMPESLAQPSLCMSLGTPSGNSLLPFTSVVVEGREQVKASSFSLSQRVRTILPKPLKKSLSMNSETNKTSNSQLRIARPPADVRGKNQLLPRYWPRITDQELEQLSGNLNSTVIPLFEKQLSASDAGRIGRLVLPKACAEAYFPPINQSDGIPLKMQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLKAGDTVTFSHIDPGGTLVMGFRKSSSSTDTQDASASASAISNGLSPSRTIFGENEYNPSAKDADFLPEMKGSKVPDISRRSENIYAANGDLGLSGSDNHRDMNINGLIKQSIAVSEKRRTRNIGPKSKRLLIHSEDAQELKLTWDEALDLLRPPPSAKPSFVTIEDHVFEEYDEPPVFGKRTIFTARPSGEQDQWAQCDDCSKWRRLPVDILLPLKWTCSDHAWDTCRSTCSVPEELTPKELDIFPRTTGDSKKRRTVESNGYTKEHEPTGLDALASAAVMGGNVGDRGEPSGGATTKHPRHRPGCTCIVCIQPPSGKGKHKPSCTCNVCLTVKRRFKTLMLRKKKRQSEREAEAAQKENNHQEDDRKSNTCVEEASLHTLDSRKQDIPNRIQQPDVGEACAGELDLNYHPIREENQSEMIHLLKMMSRIETYCHHIDDNKQPNGSTSYPSNQEGSVEPSLLPESTAGKGTKDVHDEFLFSRNWERSIQFRQKK* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00637 899 Coils Coil 744 771 - -
Pte16g00637 899 Gene3D - 590 643 - -
Pte16g00637 899 ProSiteProfiles B3 DNA-binding domain profile. 329 430 IPR003340 GO:0003677
Pte16g00637 899 MobiDBLite consensus disorder prediction 750 777 - -
Pte16g00637 899 Pfam CW-type Zinc Finger 599 641 IPR011124 GO:0008270
Pte16g00637 899 SUPERFAMILY DNA-binding pseudobarrel domain 326 432 IPR015300 -
Pte16g00637 899 MobiDBLite consensus disorder prediction 427 446 - -
Pte16g00637 899 MobiDBLite consensus disorder prediction 650 668 - -
Pte16g00637 899 MobiDBLite consensus disorder prediction 650 673 - -
Pte16g00637 899 CDD B3_DNA 327 428 IPR003340 GO:0003677
Pte16g00637 899 MobiDBLite consensus disorder prediction 746 777 - -
Pte16g00637 899 ProSiteProfiles Zinc finger CW-type profile. 594 644 IPR011124 GO:0008270
Pte16g00637 899 SMART B3_2 329 429 IPR003340 GO:0003677
Pte16g00637 899 Pfam B3 DNA binding domain 329 428 IPR003340 GO:0003677
Pte16g00637 899 Gene3D - 307 434 IPR015300 -
Pte16g00637 899 FunFam B3 domain-containing transcription repressor VAL1 307 434 - -
Pte16g00637 899 MobiDBLite consensus disorder prediction 842 879 - -
Pte16g00637 899 MobiDBLite consensus disorder prediction 844 865 - -
Pte16g00637 899 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00637 Pte-Chr16 18324632 18331176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00637 1 785 B3 DNA Binding Superfamily AT2G30470 49.437 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte16g00637 B3 5.5e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00637 K09287 - qsa:O6P43_014159 1052.35