Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00623 ATGGCAGCACAGGCTTTGGTGTCATCATCCTCTCTCACCTCTTCAGTTGAAGCTGCCAGACAACTACATGGAAGAAGACCAACTCGAGTGACTCCCAGAAGAGATTCCTTTATTGTCAAGGCAACCGCAACTCCTCCCGTTAAGCAAGGAGCAGACAGACAATTGTGGTTTGCATCAAAACAAAGTCTTTCTTACTTGGATGGCAGCCTTCCAGGTGACTATGGATTTGATCCTCTTGGACTCTCAGACCCTGAAGGCACAGGAGGCTTCATTGAGCCAAAATGGTTGGCATATGGTGAAATCATCAACGGACGTTTTGCTATGTTAGGTGCAGCGGGTGCCATAGCCCCTGAGATTCTAGGGAAGCTTGGACTCATCCCAGAATCAACAGCTCTACCATGGTTCAAAACGGGTGTGATCCCACCAGCTGGAACATATGATTACTGGGCAGACCCTTTCACACTCTTCGTATTTGAGATGGCACTTATGGGGTTTGCAGAACACAGAAGGTACCAAGATTGGTCCAAACCTGGGTCCATGGGGAAGCAGTATTTCTTGGGGTTGGAAAAGTTTCTAGGAGGTTCTGGTGATCCAGCCTACCCAGGTGGACCTTTGTTCAACCCTCTTGGTTTTGGGAAAGATGAGAAATCATTGAGGGAGTTGAAGCTGAAAGAAGTGAAGAATGGAAGATTGGCCATGTTGGCTATCTTGGGTTACTTTGTACAAGGCCTTGTGACAGGTGTTGGACCTTATCAAAATCTCCTTGACCATTTAGCTGACCCCGTCAACAACAATGTCTTGACTAGCCTTAAGTTCCATTAA 822 0.4696 MAAQALVSSSSLTSSVEAARQLHGRRPTRVTPRRDSFIVKATATPPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKLGLIPESTALPWFKTGVIPPAGTYDYWADPFTLFVFEMALMGFAEHRRYQDWSKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSLRELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00623 273 SUPERFAMILY Chlorophyll a-b binding protein 52 269 - -
Pte16g00623 273 Gene3D Chlorophyll a/b binding protein domain 54 272 - -
Pte16g00623 273 Pfam Chlorophyll A-B binding protein 64 242 IPR022796 -
Pte16g00623 273 FunFam Chlorophyll a-b binding protein, chloroplastic 54 272 - -
Pte16g00623 273 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 10 268 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00623 Pte-Chr16 16088905 16090259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00623 1 274 Chloroplast and Mitochondria Gene Families AT1G61520 85.455 1.12e-163 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00623 K08909 - zju:107416800 488.034