Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00614 ATGTCTTCCTTAAGGTCCTACAGCAAAGTCAATGAGATTGAACAAGCTTGGCTTCAAGCCCGCAACAGAACCAGAAAGAGAATCACTATCATATGCTTGTCCTCCATTGTTCTAATTGGTGTTGTTGTTGCTGCTCTTCTGGGAACATCTGCTCGAAACTCCAGAGACAATTCAAACAATGGTGATGTTAATCAACAGTCTCTGTCGAGTTCTGTGAAAGCTGTATGCGATATTACCTTATACAAAGATGTTTGTTTTAGCAGCCTAAGCACAATGGTGAACTCAAGCGGCCAGCATCAGCCTGAGGACCTCTTTAGATTCTCAGTTATGCTGGCGTTGAATGAAGTATCCAAAGCCGCTGAGCATTTTTCAGAAAACGAAGCTTTCAGAAGTGTAATAAGTCATGATAATCTGACAACTGCAGCTTTGGGAAATTGTGTTGAACTTCTGGGATTTGCTGTTGATCATCTAAACAACTCTTTGATCTCTGCCCAACAATCTTTTTTGCTTTCTGCTTTCGAAGACATCCAAACATGGCTAAGCGCCGCAGGTACTTACCAGCAGACATGCATTGATGGTGTAGAAGAGGCAAAGCCAGAACTGGTGGCCAGTATAGCTGACTATATGAAAATTTCTATTGAGCTAACTAGCAATAGCCTTGCAATCATTACTTGGATTGCAAAGGTTGTAGACTCTGTGAGCATGAGGCGCTTAATGAGTTTACCCCAAGAAAATATGAAGACAGCAGAATGGCTAAGTTCAAAAGATAGGAAGCTTCTCCAAACTTCAGATTTGCGGAGGCGCGCTGATATTGTTGTAGCAAAAGATGGATCAGGAAAATATAGAAGGATCAATGATGCCCTTGAAGCAGTTCCAGACAAAAGCAAGAGAAGGACAGTGATCTATGTCAAGAAAGGAGTTTACTTTGAAAATGTCAGGGTTGAAAAGTCTAAATGGAATGTTATGGTGGTTGGTGATGGAATTACTTCAACAATTGTATCTGGAAGCCTTAACGTTGTTGATGGAACTCCCACATTTTCAACAGCAACCTTTGCTGTTTTTGGCCGGGGCTTCATTGGCAGAGACATGGGGTTCCGTAACACTGCTGGTCCACAAAAACATCAAGCTGTGGCCCTCATGGCAAGTGCTGACGAAGTTGTCTTCCACAAGTGTCACATTGATGCATTCCAAGACTCTCTCTATGTACACTCCAACCGTCAGTTTTATAGTGAATGCAACATTTATGGTACAGTTGATTTCATCTTCGGGAATTCAGCAGCTGTGATCCAAAACTGTAGAATTCTGCCGAAGAAACCAATGCCTGGACAGCAGAACACAATCACAGCTCAAGGCAAAGTTGATCCTAACCAGAACACAGGAATCTCAATTCAGCATTGCAACATTGCACCCTTTGGGAATTTGAGCTCAGTTCAAACGTATCTTGGGAGGCCTTGGAAGAATTACTCTACAACTGTTTACATGCAGTCAACAATGGCTGGCTTTATCAACCCTAATGGCTGGTTACCGTGGGTAGGAAATTCTGCACCTGATACCATATTCTATGCTGAGTTTCAGAATGTTGGACCAGGTGCTTCAACAAAGAATAGGGTCAAGTGGAAGGGTTTGAGATTCATCAACAGCATGGAAGCAAGTAAATACACAGTCAAGGCTTTTCTCAAAGGAGATAAGTGGGTCTCATCTTCTGGGTCAACCTTCAAATCTGGTCTCTAG 1731 0.4252 MSSLRSYSKVNEIEQAWLQARNRTRKRITIICLSSIVLIGVVVAALLGTSARNSRDNSNNGDVNQQSLSSSVKAVCDITLYKDVCFSSLSTMVNSSGQHQPEDLFRFSVMLALNEVSKAAEHFSENEAFRSVISHDNLTTAALGNCVELLGFAVDHLNNSLISAQQSFLLSAFEDIQTWLSAAGTYQQTCIDGVEEAKPELVASIADYMKISIELTSNSLAIITWIAKVVDSVSMRRLMSLPQENMKTAEWLSSKDRKLLQTSDLRRRADIVVAKDGSGKYRRINDALEAVPDKSKRRTVIYVKKGVYFENVRVEKSKWNVMVVGDGITSTIVSGSLNVVDGTPTFSTATFAVFGRGFIGRDMGFRNTAGPQKHQAVALMASADEVVFHKCHIDAFQDSLYVHSNRQFYSECNIYGTVDFIFGNSAAVIQNCRILPKKPMPGQQNTITAQGKVDPNQNTGISIQHCNIAPFGNLSSVQTYLGRPWKNYSTTVYMQSTMAGFINPNGWLPWVGNSAPDTIFYAEFQNVGPGASTKNRVKWKGLRFINSMEASKYTVKAFLKGDKWVSSSGSTFKSGL* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00614 576 CDD PMEI-like_3 74 228 - -
Pte16g00614 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 227 IPR035513 -
Pte16g00614 576 FunFam Pectinesterase 264 576 - -
Pte16g00614 576 NCBIfam pectinesterase inhibitor domain 65 226 IPR006501 GO:0004857
Pte16g00614 576 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Pte16g00614 576 Gene3D - 266 576 IPR012334 -
Pte16g00614 576 SMART PMEI_2 67 222 IPR006501 GO:0004857
Pte16g00614 576 PANTHER PECTINESTERASE 39 566 - -
Pte16g00614 576 SUPERFAMILY Pectin lyase-like 268 573 IPR011050 -
Pte16g00614 576 Pfam Plant invertase/pectin methylesterase inhibitor 71 222 IPR006501 GO:0004857
Pte16g00614 576 FunFam Pectinesterase 68 227 - -
Pte16g00614 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 226 IPR035513 -
Pte16g00614 576 Pfam Pectinesterase 270 562 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00614 Pte-Chr16 14924868 14927140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00614 7 577 Carbohydrate Esterase AT3G10710 55.846 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00614 - - qsa:O6P43_029775 811.216