Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00613 ATGCATGCAGCTGTGTCCGGTGAGAGATTTATAGCAGTGGACGTGACATTCAAAAATACAGCAGGTCTTGAAAAGCACCAAGCAGTGGCTGTGAGGAACAATGCAGATCTCTCAACATTCTACCGTTGCAGCTTTGAGGGCTACCAGGACACCCTTTATGCCCATTCTCTTAGACAATTTTATAGAGAATGTGACATATATGGCACTGTCGATTTCATATTTGGTAATGCTGCTGCAGTGTTCCAGACTTGCAATATATATGCCAGAAAACCATTGCCAAATCAGAAGAATGCCGTTACGGCGCAGGGCAGAACCGATCCAAACCAAACCACAGGGATCTCAATTCAAAACTGCACTATTGAAGCTGCACCAGATTTGGCTATGGACTTGAATTCTACCTTGAATTACTTGGGCAGACCATGGAAACAGTACGCAAGGACTGTGTACATGGAGTCATACATAGGAGAGCTTATCACTCCAGTTGGATGGTTGGAATGGAATGGAACAGTAGGGTTGGATACAGTTTACTATGGCGAGTACAGGAATCATGGACCTCGTGCTAACACAAGTGAGAGAGTTCGATGGCCTGGTTACAACTTGTTGAATGCAACACAAGCTCTGAACTTCACAGTCTACAATTTTACATTAGGAGACACATGGCTGCCTGACACTGACATACCCTTCGTTGGAGGCTTGATGGAACTAGATTTTTAG 714 0.444 MHAAVSGERFIAVDVTFKNTAGLEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAAVFQTCNIYARKPLPNQKNAVTAQGRTDPNQTTGISIQNCTIEAAPDLAMDLNSTLNYLGRPWKQYARTVYMESYIGELITPVGWLEWNGTVGLDTVYYGEYRNHGPRANTSERVRWPGYNLLNATQALNFTVYNFTLGDTWLPDTDIPFVGGLMELDF* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00613 237 PANTHER PECTINESTERASE 4 224 - -
Pte16g00613 237 FunFam Pectinesterase 4 2 232 - -
Pte16g00613 237 Pfam Pectinesterase 4 217 IPR000070 GO:0030599|GO:0042545
Pte16g00613 237 Gene3D - 2 234 IPR012334 -
Pte16g00613 237 ProSitePatterns Pectinesterase signature 2. 66 75 IPR033131 -
Pte16g00613 237 SUPERFAMILY Pectin lyase-like 4 231 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00613 Pte-Chr16 14922542 14923386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00613 4 233 Carbohydrate Esterase AT3G10720 76.522 4.56e-136 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00613 K01051 - qsa:O6P43_029776 436.032