Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00593 ATGGAGAAGGATTTTGATGACAAGTTGAATATTCAAGACAATTCCTACAGTGGAATCGATGGGAATGGAAGCGTAACTAGATCCAAAAGCTTTGTTTTCAGGGCACCCCAGAAAAATTTCACCGTTCAAGACTTTGAATTGGGAAAAATCTACGGTGTTGGTTCTTATTCTAAGGTGGTAAGAGCCAAGAAGAAAGACTCAGGAATGGTCTATGCCTTGAAGATAATGGATAAGCAATTTATAACAAAAGAGAACAAAACAGCATATGTGAAGTTGGAGCGTATAGTACTTGACCAATTGGACCATCCTGGTGTTGTCAGGCTATTTTTCACATTTCAAGATACATTTTCTTTGTATATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAGATAACCAGGAAACGCCGTTTGTCAGAGGAGGAAGCTCAATTTTATACAGCTGAAGTTGTTGATGCTCTTGAGTACATACATAGTTTGGGATTGATACACCGCGATATTAAGCCTGAGAACTTACTGCTTACTGCTGATGGGCATATCAAAATAGCTGATTTTGGGAGTGTAAAGCCCATGAAAGATAGCCAGATCACGGTGCTTCCAAATGCAGCATCAGATGACAAGGCATGTACATTTGTGGGGACAGCGGCTTATGTTCCTCCAGAAGTTCTTAATTCTTCTCCTGCAACTTTCGGCAATGACCTTTGGGCACTTGGATGTACATTATACCAAATGCTTTCTGGAACTTCTCCTTTTAAAGATGCAAGTGAATGGCTTATCTTCCAAAAAATCATTGCGAGGGATATAAACTTTCCAGATTACTTTACCCAGGAAGCTAGGGACCTTATTGACCAATTATTGGACCTAGATCCTAAAAGAAGACCTGGTGCAGGACCTGATGGTTATGCTGTAATCAAGGCACATCCTTTTTTCAAGGGAATTGACTGGGATAATCTACGATCACAGACTCCACCGAAGCTCGCTACAGGAGTAGGAGTATTACTTTATGGCACTTTAGATATTAAACTTTTTAAAGATTAA 1044 0.3994 MEKDFDDKLNIQDNSYSGIDGNGSVTRSKSFVFRAPQKNFTVQDFELGKIYGVGSYSKVVRAKKKDSGMVYALKIMDKQFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITRKRRLSEEEAQFYTAEVVDALEYIHSLGLIHRDIKPENLLLTADGHIKIADFGSVKPMKDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQKIIARDINFPDYFTQEARDLIDQLLDLDPKRRPGAGPDGYAVIKAHPFFKGIDWDNLRSQTPPKLATGVGVLLYGTLDIKLFKD* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00593 347 ProSiteProfiles AGC-kinase C-terminal domain profile. 313 347 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte16g00593 347 SMART serkin_6 45 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00593 347 Gene3D Transferase(Phosphotransferase) domain 1 129 324 - -
Pte16g00593 347 FunFam 3-phosphoinositide-dependent protein kinase 2-like 43 128 - -
Pte16g00593 347 Gene3D Phosphorylase Kinase; domain 1 43 128 - -
Pte16g00593 347 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 325 - -
Pte16g00593 347 Pfam Protein kinase domain 47 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00593 347 SUPERFAMILY Protein kinase-like (PK-like) 25 327 IPR011009 -
Pte16g00593 347 FunFam 3-phosphoinositide-dependent protein kinase 2-like 129 327 - -
Pte16g00593 347 CDD STKc_PDK1 43 312 IPR039046 GO:0004674
Pte16g00593 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Pte16g00593 347 ProSiteProfiles Protein kinase domain profile. 45 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00593 Pte-Chr16 12511681 12518650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00593 1 329 AGC Kinase Gene Family AT3G10540 83.939 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Pte16g00593 Pkinase 4.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00593 K06276 - qsa:O6P43_004956 593.578