Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte16g00581 | ATGACTGATTTTCAGCCGCTACAACAGAAGCCTGAATCAACTGATGAAACCTGCTCAGAGTTTGAACGGGGTTTTGATGAATTAATGCGAGAGAATTTGGATGATTGCATATCATTTCCTTCATGTAGCTCCACGCGCAGTCCAGATGATGATGATGATGAGGAAGGTGAACAGCTTGTTCGGAGGAGAAGGAGGTCTGACCTTGAAGGGGATGATTTGGCGGAGTCTTCAGCTGCAAGAAGGCGTCATACACGAATATTGAGCCGCTGGGCTGCAAGGCAGGCACAGGAGATGATAACAACTATTGAGAGGAGGAATCGAGAATCTGAGTTAATGGCACTTGCTGGGTTACACACAGTTTCAATGCTGGACTCTTCCTTTTTGAGGGGGTCTCAGTCTCCAACATCAGGTCAGCAGGGCTCTGTTGAGAGGCCTAGCACTCAGGCTTCAGCTATTTTGCAAATGTGGCGGGAATTGGAGGATGAGCAGTTGTTGAATCGGGCAAGTGAAAGAATGACGGGAAGGCTGAGACAACACAGGAGTGTTGAGTCTAATACTCATACTTCAAGTATAAATTTGTCAGATAGTCAGGGGAGTGAGAACCCAGGAAGTCTAGGAGATCCTAGTGAAAGTGAAAATGATTATGGGACTTGGTCACAAGATCAGATTGGCTCACAGAATGATGAAAGAGATAACCGATCTAGCAGGGAACAATCCCCTGATATTGGTGATGCAGAAAGGGAGAGAGTCAGACAAATTGCTAGGGGATGGATGGAGAGTGGCACCAGTGATCTTTCATCTAATGTTACTCATAGGACTAATGGTCCCAGAGCTGAATGGCTTGGTGAAACAGAACGTGAAAGGGTGAGAATTGTCAGGGAATGGGTGCAAATGACAAGTCAGCAAAGAGGATCTTGTGGTGGTCGGAGGGATATTCAAGCTAGGGGACGTGGTTCTCAAGCTGATCGAGTGGGTGATGCAGACAATGATGAAGGCCAACCAGAGCATGTCCACAGGGACATGAGGTTTCGTGGAAGGCAAGCGCTACTTGATTTGCTTATGAGGATAGAGAGGGAAAGACAAAGGGAGCTTCAGGCTCTGGTAGAACACCGAGCTGTCTCAGATTTTGCTTATCGCAATCGCATTCAGTCGTTACTAAGAGGGAGATTTCTGCGAAATGAAATAACTGTCGAAGAGGAGATACCTCTTCCAATGGCTGCACCTGAGTTAGTTCAATTAAGACAGCGGCATACTGTATCTGGTTTAAGGGAAGGGTTTCGCTCAAGATTAGAAAATTTTGCATGTGTTCAAGATGGTATCCATTTTGATACTACATCTGATAATGATGCTGGCAGTTCAAGGAATGATGAGAACCAATCAATGAATTCTCTGACTACTAGAGAACATAATCTGGAACAGGTCCAAATCAGGAGTTCTGAAACTGATGTCAGAGAATTGCCTGATCAAATGGGGACATTTCTAAGTAGTACAACTGGTGAGAGTTTGGAATCGCAGAGAACTGTTAATCAGACGCAAAATTTGCAGGAGCAGACTCCTGAAGCTGTGGAAAGACAGTGGCAGAGAACAGCAAATGGTGCATTGAATCAATGGGGGGATAACAACACTGAAGATACGGATAGAAGTTGGCAAGAAAATGCAGCGAGTACTGGGCCCCAGGATGCTTCGGTAAATGAACAGGGACAACATCAGGCACGAGAAGCCAGGGGAATCTGGCATGAGGATTCCTCAAGGGAGGGTGCTGGGAACTGGTCTGAAGAACTTGGTGGGCCCTTAAGGATTCACCATGGTATTCACTTGAGGAGATTGAATAGATTTCATCCACCTGACGATGATAATGTTTACAGTATGGAGCTTCGAGAACTTCTGAGCAGGAGAAGTGTCTCCAATCTTCTACGCAGTGGCTTCCGGGAAAGTTTGGACCAATTAATACAGTCATATGTTGAAAGGCAAGGTCAGGCCCCCATTGATTGGGATTTGCATAGAAACATGCCAACAACTTCCCCTGCGTCACCAGAGCTGGACGTAGATATTCAAAGAGATGACCAGAATGACGATCAAAGTGGGGCTATTAACAGACCATCGCTGGTCTTGCCATCACCTCCAGTGCCTCCACCACAGCCACTATGGCACCATGACTTACATGACACTGGCTGGTCTCGTCACAGCATTCACCTTTCTGAAAATGAGTGGGAGATGATTAATGATCTGAGAGCAGACATGGCAAGACTTCAGCAGGGCATGAGTCACATGCAGAGGATGTTAGAAGCCTGCATGGTTATGCAGCTGGAGTTGCAACGTTCTGTCAGACAGGAAGTTTCTGCTGCCTTGAATCGATCTGTTGGTGAAAAAGGGATGGTTGTGGAGACATCAGAGGATGGATCTAAATGGGTTCAAGTTAAACAAGGAATTTGCTGTGTTTGTTGTGACAATCATATTGATTCACTTCTGTACAGATGTGGGCACATGTGCACTTGCTCTAAGTGTGCCAATGAGTTGGTTCGTGGAGGAGGCAAGTGCCCTCTTTGCCGAGCGCCCATTGTTGAGGTGGTCCGAGCATATTCTATATTGTAA | 2592 | 0.4618 | MTDFQPLQQKPESTDETCSEFERGFDELMRENLDDCISFPSCSSTRSPDDDDDEEGEQLVRRRRRSDLEGDDLAESSAARRRHTRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQSPTSGQQGSVERPSTQASAILQMWRELEDEQLLNRASERMTGRLRQHRSVESNTHTSSINLSDSQGSENPGSLGDPSESENDYGTWSQDQIGSQNDERDNRSSREQSPDIGDAERERVRQIARGWMESGTSDLSSNVTHRTNGPRAEWLGETERERVRIVREWVQMTSQQRGSCGGRRDIQARGRGSQADRVGDADNDEGQPEHVHRDMRFRGRQALLDLLMRIERERQRELQALVEHRAVSDFAYRNRIQSLLRGRFLRNEITVEEEIPLPMAAPELVQLRQRHTVSGLREGFRSRLENFACVQDGIHFDTTSDNDAGSSRNDENQSMNSLTTREHNLEQVQIRSSETDVRELPDQMGTFLSSTTGESLESQRTVNQTQNLQEQTPEAVERQWQRTANGALNQWGDNNTEDTDRSWQENAASTGPQDASVNEQGQHQAREARGIWHEDSSREGAGNWSEELGGPLRIHHGIHLRRLNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGQAPIDWDLHRNMPTTSPASPELDVDIQRDDQNDDQSGAINRPSLVLPSPPVPPPQPLWHHDLHDTGWSRHSIHLSENEWEMINDLRADMARLQQGMSHMQRMLEACMVMQLELQRSVRQEVSAALNRSVGEKGMVVETSEDGSKWVQVKQGICCVCCDNHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVVRAYSIL* | 864 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 226 | 247 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 493 | 569 | - | - | |
Pte16g00581 | 863 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 797 | 861 | IPR013083 | - | |
Pte16g00581 | 863 | SUPERFAMILY | RING/U-box | 803 | 856 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 493 | 591 | - | - | |
Pte16g00581 | 863 | ProSiteProfiles | Zinc finger RING-type profile. | 811 | 850 | IPR001841 | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 302 | 337 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 172 | 247 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 37 | 80 | - | - | |
Pte16g00581 | 863 | Coils | Coil | 740 | 760 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 444 | 463 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 183 | 225 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 572 | 587 | - | - | |
Pte16g00581 | 863 | Pfam | Zinc finger, C3HC4 type (RING finger) | 808 | 855 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 56 | 80 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 315 | 337 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 665 | 709 | - | - | |
Pte16g00581 | 863 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 112 | 863 | - | - | |
Pte16g00581 | 863 | MobiDBLite | consensus disorder prediction | 127 | 148 | - | - | |
Pte16g00581 | 863 | CDD | mRING-HC-C3HC5_NEU1 | 811 | 860 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte16g00581 | Pte-Chr16 | 11229432 | 11235181 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte16g00581 | 811 | 857 | C3H Transcription Factor Family | AT3G06140 | 42.553 | 1.55e-06 | 49.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte16g00581 | - | - | cave:132186690 | 1226.08 |