Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00577 ATGGAGTTCATAGCTTTGCTTGTCCTTTTCTGTGTGGCATCTTCACTTCACACTTCATCTTCAAAAATTGTTACTCTCAGAAAAGGCTCTTCTCTCTTTGTGAAAAATCCAGATGATATTATTGAATCACCAAATGGTGTTTTTGCTGCTGGCTTTTTTCCTGTTGGTGACAATGCTTACTGCTTTGCTATATGGCTCAACAACCCCAGAAGCAACAACACAGTTGATGGCACAGTGGTTTGGATGGCTAACCGTGATTATCCTGTCAATGGTAAGAACTCAAAGCTCTCGCTACTTAAGAATGGAAATCTTGTCTTGACTGATGCAGGCGCCTCTACTGTTTGGGAGACAGACACTGCTTCTGACTCCTCAGCATATCTACATCTTCATGACACTGGTAATCTTATTCTAACGAATTCAGGAGGTAAAGTTTTGTGGCAAAGCTTTGATTTTCCAACAAATACATTACTTCCAGGACAGAAGCTTACCAGGTTCAGCAAACTGGTCTCTTCGAGAAGCAGCACAAACCAGTCCACTGGTTATTACCATCTCTACTTCGACAATGACAATGTTCTTCGCCTGCTCTATGATGGCCCCAATGTTTCCAGCATTTACTGGCCATATCCATGGCTTGTGAACTTACAAGCAGGAAGGGATACATATAATAGTAGTAGAGTTGCCATTTTTGATGTGCTGGGAAAGTTTATCTCATCAGATGGTTTTACTTTTACAACATCTGATTATGGAATTGTGTTGCAAAGAAGATTGAAGATTGATTATGATGGAAACGTTAGAGTTTACAGTAGGGAGCAAGGTCAAGAGGATTGGTATATTTCATGGTTTGTCATAGCTGAACGTATGATTCATGGTCTTTGTGGCCCCAATAGCTTTTGGAGATATGATGCTGTTTATGGTGCCAAGTGCTCTTGCCTTCCAGGATTCAAAGTGAAGAACAACAAGGACTGGTCTACTGGTTGTGAACCAAAATTTAACCCTTCTTGCAAGGAAAGTGAATCTAGCTTCTTGCGTATAAGCCATATCGATTTTTTTGGTTATGATTATGGGCAATACTCCAATTACACATTGAAGGAATGTGAAAATATTTGTTTAAAATGGTGTAACTGCAAGGGATTCAATTATGCCTTCTCTTGGAATAGTGGGATTGGAGTTTATACGTGTTATCCTAAAACACAATTACAAAATGGGAATGAACATTATTCTGAAGGAAACTTCCATCTTAAAGTCCCAAAAAACCAGACTTTCTCATTCACAAATGCGTTGGGTGAAACATCTAATCTCAATTGCTCTTATGTAGATTCAGCTCCACTAGAAAGGGTATATGATGAAGTTGGCGACAATATAATAGTGAGATTTTTGCTTTGGTTTGCAGTTGGAATTGGAGCAGTGGAGATGGTTGTTATCTTGTTGGTATGGTGTTTATTTATCCGAAGAAGCCAAGAAAAATCTTCAGAACACAAGTATGAATCTGTCACAGGATTTAGAAGGTTTAGCTACAAGGAGTTGAAGAAGGCAACAAGGGGTTTCATACAAGTTATTGGAAAAGGTGCAGGAGGAACTGTCTACAAAGGTGTTTTGTCAGATAAGAGAATTGCAGCTATCAAATGTCTTGAAGATAATAACCAAGGTGAAGAAGATTTTCTTGCAGAAGTGAACATCATAGGAAGACAGAACCATATGAATTTGATTGAGATGTGGGGCTACTGTGCTGAAGGCAAGCACAGATTATTGGTATATGAGTACATGGAGTATGGTTCTTTGGCAGATAATCTGAAATCAAAACAACTAGATTGGTGTACAATGTTCGATATTGCCTTAGGTAGTGCTAGAGGCCTAGCTTATCTTCATGATGAATGTCTTGAGTGGATTTTACATTGTGATGTGAAGCCTCAGAATATACTCCTCGACTCTAGCTTCAAACCAAAGATAGCTGATTTTGGCCTTTCAAAGCTGATAAGAAACAGAAATGACATTGACAAATTAAGATTCTCAAAGCTAAGAGGGACAAGAGGGTATATGGCTCCAGAATGGGTTTTTAATTTGCCAATTACCTCAAAGGTTGATGTGTATAGTTATGGGATTGTTGTCTTGGAAATGTTGACTGGAAAAAGTCCAGCATCAACCATTGAAACAGTGGTAGATGGAGGTAAGACGCATCACAAAGGGCTGATCACTTGGGTGAAGGAGAAAAGGCGTAATGGAATTGCAATGGGATCATGGGTAGAACAGATTGTAGATTCCCATATTGGAGAATATGACAGAAGTAAAATGAAAATATTGGTAGAAGTGGCACTGGAATGTGTCAATGAAGACAACGATGGAAGACCAACAATGAGGCAAGTAGTTGAGATTCTTGAGAAAAATCAACTCAGTTGA 2394 0.3901 MEFIALLVLFCVASSLHTSSSKIVTLRKGSSLFVKNPDDIIESPNGVFAAGFFPVGDNAYCFAIWLNNPRSNNTVDGTVVWMANRDYPVNGKNSKLSLLKNGNLVLTDAGASTVWETDTASDSSAYLHLHDTGNLILTNSGGKVLWQSFDFPTNTLLPGQKLTRFSKLVSSRSSTNQSTGYYHLYFDNDNVLRLLYDGPNVSSIYWPYPWLVNLQAGRDTYNSSRVAIFDVLGKFISSDGFTFTTSDYGIVLQRRLKIDYDGNVRVYSREQGQEDWYISWFVIAERMIHGLCGPNSFWRYDAVYGAKCSCLPGFKVKNNKDWSTGCEPKFNPSCKESESSFLRISHIDFFGYDYGQYSNYTLKECENICLKWCNCKGFNYAFSWNSGIGVYTCYPKTQLQNGNEHYSEGNFHLKVPKNQTFSFTNALGETSNLNCSYVDSAPLERVYDEVGDNIIVRFLLWFAVGIGAVEMVVILLVWCLFIRRSQEKSSEHKYESVTGFRRFSYKELKKATRGFIQVIGKGAGGTVYKGVLSDKRIAAIKCLEDNNQGEEDFLAEVNIIGRQNHMNLIEMWGYCAEGKHRLLVYEYMEYGSLADNLKSKQLDWCTMFDIALGSARGLAYLHDECLEWILHCDVKPQNILLDSSFKPKIADFGLSKLIRNRNDIDKLRFSKLRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMLTGKSPASTIETVVDGGKTHHKGLITWVKEKRRNGIAMGSWVEQIVDSHIGEYDRSKMKILVEVALECVNEDNDGRPTMRQVVEILEKNQLS* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00577 797 Gene3D Phosphorylase Kinase; domain 1 479 587 - -
Pte16g00577 797 PANTHER OS07G0415500 PROTEIN 6 793 - -
Pte16g00577 797 Pfam D-mannose binding lectin 78 166 IPR001480 -
Pte16g00577 797 ProSiteProfiles Bulb-type lectin domain profile. 17 150 IPR001480 -
Pte16g00577 797 FunFam S-receptor-like serine/threonine-protein kinase 483 587 - -
Pte16g00577 797 CDD PAN_AP_plant 330 416 - -
Pte16g00577 797 FunFam Putative receptor-like protein kinase 588 796 - -
Pte16g00577 797 ProSiteProfiles PAN/Apple domain profile. 334 410 IPR003609 -
Pte16g00577 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 209 IPR036426 -
Pte16g00577 797 Gene3D - 23 151 IPR036426 -
Pte16g00577 797 CDD STKc_IRAK 519 793 - -
Pte16g00577 797 SMART serkin_6 513 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00577 797 PIRSF SRK 1 796 IPR024171 GO:0004674
Pte16g00577 797 Pfam Protein kinase domain 516 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00577 797 FunFam Putative receptor protein kinase ZmPK1 20 151 - -
Pte16g00577 797 FunFam Serine/threonine-protein kinase 153 280 - -
Pte16g00577 797 SMART blect_4 31 152 IPR001480 -
Pte16g00577 797 Pfam PAN-like domain 334 381 IPR003609 -
Pte16g00577 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Pte16g00577 797 Gene3D Transferase(Phosphotransferase) domain 1 588 797 - -
Pte16g00577 797 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Pte16g00577 797 SUPERFAMILY Protein kinase-like (PK-like) 491 792 IPR011009 -
Pte16g00577 797 ProSiteProfiles Protein kinase domain profile. 513 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00577 797 CDD B_lectin 41 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00577 Pte-Chr16 11036800 11039193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00577 323 796 Receptor kinase-like Gene Family AT4G18250 32.049 2.87e-60 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pte16g00577 Pkinase 5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00577 - - cave:132184415 934.095