Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00576 ATGGTTACTGCTGTTGAAGCATGGCATCAGCCTATGGCTGTTGAGAAATACCTTGGTGATGATGATTATGCTCAACAAAACTTCAAAGATAGAAGTGGCTATGATCCACAAACTGGAATATATCACTCACTTGTCAAACTTGGCTATGACTATGAAATCCCAACACAGCTAGAACTGGATACTGCAACATTTGTGCTGTCACAGTTCCCTGGAGCTGGATTTGCTGAATGGAGAGTTGCATACATTGATTCTGAGACAAAACAGCGTATAACATACGCAGAACTCCGCCGAGCAATTCACTCCCTTGCATCAGGGTTGTGCTATGGACATGATGTGCGTAAAGGAGATGTAGTGTTTGTTCTATCTCCTAACTCGCTCATGTATCCAATAATATGCTTGGCAGTGCTTTCAATTGGAGCAGTTCTGACAACTGCTAATCCCCTCAATTCGGTTTCTGAAATCGGCAAACAAGTAAGAGACTCAGGTGCAAAACTAGCCATATCGACACCTGAAGATCTCCACAAGTTGATCCCAACTGGGGTTCCTGTAATTCTCACCTCTCGTCCGGATGACGGTGTCATGTTATCTGTGCAAGAATTGATTGATTGCTGTACTACTGAACCGATTGAGATTCCAAGAGTTTCTATTGCTCAATCTGACACTGCAGCAATACTATACTCTTCAGGAACCAGAGGAACAAGCAAAGGGGTAGTGCTAACTCATGCCAATTTCATTTCCATCATGACATTACTCAGATGGTCAGTGGATGTAACTTCATCACATGATGATGTCTTCTTGTGTTTCCTTCCAATGTTTCACATATACGGACTCGCTTTCTTTGGATTAGGATTGCTGTGTTCAGGTATTACCACAGTACTGATGCAGAAATTCGACTTCATAGCAATGCTTGATGCAATACAAGAATATAAAGTAAGTAATATCCCAGCAGTACCCCCAGTAATTCTTGCACTAGTGAAATACTCAAGCCAAGCTGGACGTGACTTGTCAAGCTTAAGAAGGATCAGTTCAGGTGCTGCACCACTCAGTAAAGAATTGGCTATAGCTTTTCGCCAAATGTTTCCTTGGGTTGAGCTTCGACCAGGTTATGGATTAACTGAAAGCTGTGGAGCAACATCTTACTTTGTCTATGATAGAGATGCTAAGATCAGACCTGCATCTTGTGGGAGATTACTCCCAACGTTCTGTGCTAAAGTGATAGACCCTGACACAGGGAAGTCCTTGCCTCCTCTTAAAGAAGGAGAGCTCTGGATAAAGAGCCCTAGTGTCATGAAAGAATATCTGGGAAACATGGAGGCAACAGCTGCAGCATTCGATTTATCGGGGTGGCTGAAAACTGGTGATCTATGCTATTTTGATGAGGATGGATTTCTCTACATAGTGGATAGGATTAAGGAGCTCATAAAACACAATGGATATCAGGTACTTCAATCATCGGTGCAAGTAGTTTAG 1470 0.4259 MVTAVEAWHQPMAVEKYLGDDDYAQQNFKDRSGYDPQTGIYHSLVKLGYDYEIPTQLELDTATFVLSQFPGAGFAEWRVAYIDSETKQRITYAELRRAIHSLASGLCYGHDVRKGDVVFVLSPNSLMYPIICLAVLSIGAVLTTANPLNSVSEIGKQVRDSGAKLAISTPEDLHKLIPTGVPVILTSRPDDGVMLSVQELIDCCTTEPIEIPRVSIAQSDTAAILYSSGTRGTSKGVVLTHANFISIMTLLRWSVDVTSSHDDVFLCFLPMFHIYGLAFFGLGLLCSGITTVLMQKFDFIAMLDAIQEYKVSNIPAVPPVILALVKYSSQAGRDLSSLRRISSGAAPLSKELAIAFRQMFPWVELRPGYGLTESCGATSYFVYDRDAKIRPASCGRLLPTFCAKVIDPDTGKSLPPLKEGELWIKSPSVMKEYLGNMEATAAAFDLSGWLKTGDLCYFDEDGFLYIVDRIKELIKHNGYQVLQSSVQVV* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00576 489 Gene3D - 51 472 IPR042099 -
Pte16g00576 489 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 36 482 - -
Pte16g00576 489 Pfam AMP-binding enzyme 78 475 IPR000873 -
Pte16g00576 489 SUPERFAMILY Acetyl-CoA synthetase-like 78 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00576 Pte-Chr16 10998307 10999776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00576 53 482 Monolignol Biosynthesis Gene Families AT1G20510 42.105 7.38e-117 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00576 K10526 - qsa:O6P43_004973 681.019