Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00567 ATGGCTGATCCAGGTCCAGCCTCTGCAAATAGAATGCGGTGTTTCATACCTGAAAGGTTGCAGCTGCATGCGGCCATGTTAGCCTTGCAGTTTGGTTACGCTGGGTTCCATGTTGTTTCCAGAGCTGCCCTAAACATGGGAATTAGCAAACTGGTCTTCCCGGTCTATAGGAATATGATCGCCTTACTCCTACTCATTCCCTTCGCCTACTTCTTAGAAAAGAAGGAAAGGCCCGCTCTATCTCTAAACTTTGCCATTCAGTTCTTCCTGCTGGCACTTGTCGGAATAACTGCAAATCAAGGATTCTACTTGCTAGGGCTAGACAACACTTCACCTACTTTTGCGTCAGCAATACAAAACTCTGTCCCCGCCATTACGTTTCTCATGGCGGCCTTACTCAGGCAAGCACTTGAATAA 417 0.4724 MADPGPASANRMRCFIPERLQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNMIALLLLIPFAYFLEKKERPALSLNFAIQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRQALE* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00567 138 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 133 - -
Pte16g00567 138 Pfam EamA-like transporter family 26 133 IPR000620 GO:0016020
Pte16g00567 138 PANTHER WAT1-RELATED PROTEIN 24 131 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00567 Pte-Chr16 10403990 10404735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00567 1 134 Nodulin-like Gene Family AT1G75500 82.222 1.55e-72 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00567 - - zju:107420453 240.35