Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00566 ATGCAGGGAGTGATCGCATCTGGGGTCGCCTTCGCTGTACAGATATGGTGCATCGACAGAGGTGGCCCCGTGTTTGTTGCTGTGTATCAGCCTGTTCAGACTCTCGTTGTCGCTATTATGGCTTCCATCGCTTTAGGCGAAGAGTTTTACTTGGGAGGGATCATTGGAGCTGTGCTAATCATAGTGGGATTGTACCTAGTCTTGTGGGGTAAAAGTGAAGAGAGAAAGCTGGCAAAGGATGTGCCTGCAGTAGCTCAGATCACTGCAGAGCACGGTGATGCCTCCAGCAGAACAAACCATCGCAGGACGTCTCTTACTCAGCCACTTCTGCCCCAGTCGACAGAAAATGTGTAA 354 0.5085 MQGVIASGVAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIIVGLYLVLWGKSEERKLAKDVPAVAQITAEHGDASSRTNHRRTSLTQPLLPQSTENV* 118
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00566 117 PANTHER WAT1-RELATED PROTEIN 2 82 IPR030184 GO:0016020|GO:0022857
Pte16g00566 117 Pfam EamA-like transporter family 3 68 IPR000620 GO:0016020
Pte16g00566 117 MobiDBLite consensus disorder prediction 99 117 - -
Pte16g00566 117 MobiDBLite consensus disorder prediction 90 117 - -
Pte16g00566 117 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 73 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte16g00566 Pte-Chr16 10402571 10403396 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00566 3 118 Nodulin-like Gene Family AT1G75500 74.576 5.02e-53 169
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00566 - - cit:102607931 170.244