Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00550 ATGAGTTCATCTCGTCAAGCACTGTCTCAACTCACATTTATTCTTGCCTTCTCCTTACTGTACAGACCTATCATTGCTATCAAAAAGTCATATGTGGTATACTTGGGAGCCCACTCACATGGAGCTGGACACTCATCAGTTGACTTCAATCAAGTTACAGACTCTCATTACCAGTTTCTTCAGTCCTTCTTGGGAAGTTATGACACAGCTAAAGGAGCAATCTTCTACTCATATACAAAGCACATCAATGGTTTTGCTGCAACATTGGAAGAGCATGTAGCAGCTGAGATTGCCAATCATCCAAAGGTTGTCTCAGTCTTTCTGAACAGTGGCAGAAAGTTACAAACCACAAGGTCATGGGAGTTCATGAGACTAGAAGACTACAATGGAGTTATACCATCAAGTTCAATATGGAAGAAAGCCAGATTTGGAGAAGACACCATAATAGGGAACCTTGACACAGGTGTTTGGCCTGAATCTAAAAGCTTTAGTGATGAAGAGTTGGGACCAATTCTACCCAAGTGGAGAGGAATATGTGACAATGGCTCTGACCCTAGATTTCATTGCAACAGGAAGCTTATAGGAGCAAGGTACTTCAACAAAGGGTATGCTGCAGTTGCTGGCCCCATTAGTTCCTTCTTTAACTCTCCAAGAGATCATGAAGGCCATGGTTCTCACACACTATCAACAGCTGGGGGTAATTTTGTAGCAGGAGCCAATGTGTTTGGTTTTGGCAATGGAACAGCAAAGGGTGGCTCACCAAAAGCCAGGGTGGCAGCTTACAAGGTGTGCTGGCCTCCAGTTGGAGGTGAAGAGTGCTTTGATGCTGACATCTTGGCTGCATTTGATGCTGCCATTCATGATGGTGTTCATGTCTTGTCTGTGTCTCTGGGTGGAACCCCCACTGCACTGTTTAATGATAGTGTAGCCATTGGCTCCTTTCATGCCATTAAGCATGGCATAGTGGTAGTATCCTCAGCTGGAAACTCTGGTCCAGCTGATGGTACAGTGTCAAACCTTGCTCCATGGGAGATCACAGTTGGAGCAAGCACTATGAACAGGGAATTCCCAAGCTATGTCATTCTTGGAAACAACATGAGCTTCAAGGGACAGAGCTTATCATCCACAGTCTTGCCAAACAAGCTATACCCAGTTATGAGTGCAGCAAGTGCAAAAGCAGCTAATGCTTCGATTTCAGATGCGCTGCTGTGCAAAAATGGAACATTAGACCCAACAAAGGTGAAAGGAAAAATCTTGGTATGCCTTAGAGGTGACAATGCAAGAGTAGACAAGGGAGTGCAAGCATTACTAAGTGGTGCAGTAGGAATGATTCTTGCAAACAAAGAAATTAATGGGAATGAAATCATTGCCGATCCACATCTCCTCCCTGCTTCACATATCAATTACAGCAATGGTGTTTCTGTCTTTGCTTACATCAACTCTACCAGGTTTCCTCAGGCGTACGTTACATATCCAACAACACGATTAAACACAAAACCAGCACCCTTCATGGCATCCTTTTCATCAAAGGGACCAAACACCATCACACCAGAAATCCTAAAGCCTGATATCACGGCACCAGGGGTGTCTGTCATTGCTGCCTATTCAGAAGCCCAAGGACCAACCAATCAAGACTTTGACAGAAGAAGGGTTCCATATAACTCAGTGTCAGGTACATCAATGTCATGCCCTCATGTGTCTGGCATCGCTGGCCTCTTGAAAACTCTCTATCCTAGTTGGAGTCCTGCAGCAATTAAGTCAGCCATCATGACCACTGCCACTACACGTGACAATAACGCGGAACCACTGCTTGATGCCTCTAACAAGAAGGCAACACCATTTAGTTATGGAGCTGGACATGTTCAACCAAATAGAGCAATGGATCCTGGTCTTGTTTATGACATAAGTACCAGTGATTACCTGGACTTCCTCTGTTCCTTGGGATACAATGAAACACTAATATCAATGTTTAACCAGGAGCCTTATAAGTGTAGCAAAAACATTAGTCTTACAGACCTGAACTACCCTTCGATCACAGTACCAAGTCTCTCTGGGTCCATTACAGTTAGGCGAACCTTGAAAAATGTCGGTTCTCCAGCAATATATACAGCTCGCGTCCAGCAACCAAAAGGGGTTTTGGCCATTGTTAAGCCGAAGACTTTGAAGTTCAACAAAGTTGGGGAAGAGAAAAGCTTCAATGTTACTTTAGCACTTGGGAAAACCAATGGCACTAAAGACTACACTTTTGGGAGACTGATATGGTCAGATGGGAAGCATAATGTTAGGAGCCCAATTCTGGTTAAGGCTGCCTAA 2313 0.4419 MSSSRQALSQLTFILAFSLLYRPIIAIKKSYVVYLGAHSHGAGHSSVDFNQVTDSHYQFLQSFLGSYDTAKGAIFYSYTKHINGFAATLEEHVAAEIANHPKVVSVFLNSGRKLQTTRSWEFMRLEDYNGVIPSSSIWKKARFGEDTIIGNLDTGVWPESKSFSDEELGPILPKWRGICDNGSDPRFHCNRKLIGARYFNKGYAAVAGPISSFFNSPRDHEGHGSHTLSTAGGNFVAGANVFGFGNGTAKGGSPKARVAAYKVCWPPVGGEECFDADILAAFDAAIHDGVHVLSVSLGGTPTALFNDSVAIGSFHAIKHGIVVVSSAGNSGPADGTVSNLAPWEITVGASTMNREFPSYVILGNNMSFKGQSLSSTVLPNKLYPVMSAASAKAANASISDALLCKNGTLDPTKVKGKILVCLRGDNARVDKGVQALLSGAVGMILANKEINGNEIIADPHLLPASHINYSNGVSVFAYINSTRFPQAYVTYPTTRLNTKPAPFMASFSSKGPNTITPEILKPDITAPGVSVIAAYSEAQGPTNQDFDRRRVPYNSVSGTSMSCPHVSGIAGLLKTLYPSWSPAAIKSAIMTTATTRDNNAEPLLDASNKKATPFSYGAGHVQPNRAMDPGLVYDISTSDYLDFLCSLGYNETLISMFNQEPYKCSKNISLTDLNYPSITVPSLSGSITVRRTLKNVGSPAIYTARVQQPKGVLAIVKPKTLKFNKVGEEKSFNVTLALGKTNGTKDYTFGRLIWSDGKHNVRSPILVKAA* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00550 770 FunFam subtilisin-like protease SBT1.5 353 496 - -
Pte16g00550 770 ProSiteProfiles Serine proteases, subtilase domain profile. 119 627 - -
Pte16g00550 770 Pfam Subtilase family 144 619 IPR000209 GO:0006508|GO:0008236
Pte16g00550 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 115 IPR037045 -
Pte16g00550 770 Pfam Peptidase inhibitor I9 30 114 IPR010259 -
Pte16g00550 770 Pfam PA domain 401 472 IPR003137 -
Pte16g00550 770 FunFam Subtilisin-like protease SBT5.3 21 115 - -
Pte16g00550 770 Pfam Fibronectin type-III domain 672 767 IPR041469 -
Pte16g00550 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Pte16g00550 770 CDD PA_subtilisin_like 359 489 - -
Pte16g00550 770 FunFam Subtilisin-like protease SBT1.5 644 770 - -
Pte16g00550 770 Gene3D - 644 770 - -
Pte16g00550 770 Gene3D - 353 496 - -
Pte16g00550 770 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Pte16g00550 770 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Pte16g00550 770 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Pte16g00550 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 66 766 IPR045051 -
Pte16g00550 770 SUPERFAMILY Subtilisin-like 115 631 IPR036852 GO:0004252|GO:0006508
Pte16g00550 770 SUPERFAMILY PA domain 408 482 IPR046450 -
Pte16g00550 770 CDD Peptidases_S8_3 113 594 IPR034197 -
Pte16g00550 770 FunFam Subtilisin-like protease SBT1.5 146 402 - -
Pte16g00550 770 Gene3D Peptidase S8/S53 domain 146 640 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00550 Pte-Chr16 10071124 10078836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00550 30 768 Subtilisin-like Serine Gene Family AT2G04160 65.229 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00550 - - qsa:O6P43_020695 1186.02