Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00534 ATGAATAACTCAGTTTCAAACCAAAGTTTGTACATTGAAAGTGAGGATGATGATGAGGATGAGGAAAAGGTGTCTCATAAAGGTGAAAATGATGGAAACGATTCAGACTCCTCCAATTCTTCAGATGAAATCCAGCAACAGAACAGACCCGGTTCTTACAATACCAATTGGCCTCAGAGTTACAGGCAATCAATTGATCTATATAGCAGTGTACCTTCACCAGGCATTGGATTTTTGGGCACTCCTACATTATCACGACTAGGCAGCTCCTTTTTCTCCTCATCACTGACAAAAAGGCACACACCTGAATCGCTACCATCGGTGACTAAGCCTCTGTTACAACCACCCGTTGAAGAGCAACAGTACAGACGAAGTTCTCATACTCTCCTTCCCCCAATTCCGTCGAGGAAATCATCCATTAGGAAAGAATCATCAAAAGTTTCACATGAGCTTCCTATTTCACGCCATTGCTCATATGGGCAATCTGTGCTGAATGGTGTAAATGTTCTTTGTGGTGTTGGAATCCTTTCCACTCCATATGCTGCAAAAGAGGGTGGATGGCTTGGGCTTTCTATATTATTTGTTTTTGCTGTGCTGTCCTTTTATACTGGAATACTTTTGCGTTACTGCTTGGATAGCCAACCTGGTCTTGAGACTTATCCCGACATTGGGCAAGCAGCATTTGGCACCGCAGGACGAATCGCCATTTCGATAATTCTTTATGTGGAATTATATGCTTGTTGCATTGAATATATTATTCTGGAGAGTGACAACTTATCTTCACTATTTCCAAATGCACACCTGAGTTTAGGTGGATATGCGATGAATGCCCATGTTTTGTTTGCGGTGGTAACAACCCTTGCCGTTCTTCCCACTGTTTGGCTTCGAGACCTGAGCATCCTCAGCTACATCTCAGCTGGTGGAGTTATAGCGTCGATATTGGTGGTCATCTGCTTGTTCTGGGCTGGAGTGGAAGAAGTAGGCTTTCATAGTAAAGGAACCACACTAAATTTTGCAACCCTACCTGTCGCTTTGGGCCTTTATGGTTACTGCTACTCAGGACATGCCGTTTTTCCGAACATCTATACATCAATGGCAAAGCCAAACCAATTCCCAGCAGTCCTCTTATCATGTTTTGGCATCTGTACTTTACTATACGCCGGGGTTGCTGTTATGGGATATACAATGTTTGGAGAATCAACATTGTCTCAATTTACTCTTAACATGCCCCAAAATTTGGTTGCAACCAAAATTGCTGTCTGGACCACGGTTGTTAATCCCTTTACCAAGTATGCATTAACCATTTCTCCTGTGGCAATGTGTCTGGAGGAGTTGATACCGTCAAAACATTCCACGACTCACATATACGCCATTTTGATCAGAACGGGGCTGGTGGTTTCTACCCTGCTTGTTGGACTTTCCATCCCATTTTTTGGTCTAGTCATGTCGCTTATTGGGTCTTTGCTCACCATGCTTGTTACCTTGATCCTTCCTTGTGTTTGCTTCTTAAGCATATTGAGGGCCAAAGTAACAAAAGTGCAGGTGGGAATGTGTAGCATTATCATTGTAGTAGGTGTTGCATCCGCAATCTTTGGAACATACTCAGCCATGTCCAAAATAATTGAGAATTTACGAGGATAA 1641 0.429 MNNSVSNQSLYIESEDDDEDEEKVSHKGENDGNDSDSSNSSDEIQQQNRPGSYNTNWPQSYRQSIDLYSSVPSPGIGFLGTPTLSRLGSSFFSSSLTKRHTPESLPSVTKPLLQPPVEEQQYRRSSHTLLPPIPSRKSSIRKESSKVSHELPISRHCSYGQSVLNGVNVLCGVGILSTPYAAKEGGWLGLSILFVFAVLSFYTGILLRYCLDSQPGLETYPDIGQAAFGTAGRIAISIILYVELYACCIEYIILESDNLSSLFPNAHLSLGGYAMNAHVLFAVVTTLAVLPTVWLRDLSILSYISAGGVIASILVVICLFWAGVEEVGFHSKGTTLNFATLPVALGLYGYCYSGHAVFPNIYTSMAKPNQFPAVLLSCFGICTLLYAGVAVMGYTMFGESTLSQFTLNMPQNLVATKIAVWTTVVNPFTKYALTISPVAMCLEELIPSKHSTTHIYAILIRTGLVVSTLLVGLSIPFFGLVMSLIGSLLTMLVTLILPCVCFLSILRAKVTKVQVGMCSIIIVVGVASAIFGTYSAMSKIIENLRG* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00534 546 PANTHER OS05G0424000 PROTEIN-RELATED 162 528 - -
Pte16g00534 546 MobiDBLite consensus disorder prediction 1 58 - -
Pte16g00534 546 MobiDBLite consensus disorder prediction 34 58 - -
Pte16g00534 546 MobiDBLite consensus disorder prediction 116 147 - -
Pte16g00534 546 Pfam Transmembrane amino acid transporter protein 158 536 IPR013057 -
Pte16g00534 546 FunFam Amino acid transporter AVT1A 155 543 - -
Pte16g00534 546 MobiDBLite consensus disorder prediction 119 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00534 Pte-Chr16 9429673 9437815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00534 1 479 Amino Acid or Auxin Permease AAAP Family AT2G39130 75.103 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00534 K15015 - tcc:18586455 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00534 16 9429673 9437815 Pte16g00534 16 9429673 9437815 RCT