Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00529 ATGGAATCATATTGCTCAGAACTCCAATTCCTAGCTAATCCTGTGACTAACCATGTCCAAAGTGCTGAGCAGCACAACCAAGATGTCAACTCCTTAGGTTTGATTTCCTCTAGGAAAACAGCCGAAGTTGTGGACATGCTGAAGCTTATGTCTTCCACCTTCTGGGTTGCTTTGTGCCAAGCCATTGATTTGAGGTATTTGGAGGAGAAATTGAAGAACATTGTCAAGAACACAGTTAGTGAAGTTGCGAAGAAGGTTTTGACTATAGGAGTGAACAGTGAGCTCCATCCCTCAAGGTTCTGTGAGAAAGACTTGCTCCAACTGGTTGACTGTGAATATGTCTTTGCCTACATTAATGACCCCTGCAGTACAACCTATCCTTTGATGCAAAAGCTTCGACAGGTGCTAGTTGATCATGCATTTTGCAATGGTGAAAATGAAAAGAATGCAAACACTTCCATTTTCCAAAAGATTGTAGCTTTTGAAGAAGAACACAAAACCCTTTTGCCCAAAGAAGTTGATAGTGCCAGGGCTGAAATTGAAATTAATGGGAATGCTGCAATTCCTAATAAGATCAAGGAATGCAGGTCTTACCCATTGTATAGATTTATCAAGGAGGAACTTGGGACATCAATGCTGACAGGTGAGAATGTCCGATTACCTGGTGAAGATTGTGACAAGGTTTTCTCTGCAATGTGTGCTGGGAAATTGATTGATCCAATTGTTGAATGTTTAAAGGAGTGGAATGGTGCTCCTCTTCCAATATGTTAG 771 0.4112 MESYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEVVDMLKLMSSTFWVALCQAIDLRYLEEKLKNIVKNTVSEVAKKVLTIGVNSELHPSRFCEKDLLQLVDCEYVFAYINDPCSTTYPLMQKLRQVLVDHAFCNGENEKNANTSIFQKIVAFEEEHKTLLPKEVDSARAEIEINGNAAIPNKIKECRSYPLYRFIKEELGTSMLTGENVRLPGEDCDKVFSAMCAGKLIDPIVECLKEWNGAPLPIC* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00529 256 PANTHER HISTIDINE AMMONIA-LYASE 1 256 IPR001106 -
Pte16g00529 256 Gene3D Fumarase/aspartase (Central domain) 188 256 - -
Pte16g00529 256 FunFam Phenylalanine ammonia-lyase 68 190 - -
Pte16g00529 256 Pfam Aromatic amino acid lyase 1 78 IPR001106 -
Pte16g00529 256 SUPERFAMILY L-aspartase-like 1 256 IPR008948 GO:0003824
Pte16g00529 256 Gene3D - 68 187 IPR023144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00529 Pte-Chr16 9206317 9207087 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00529 1 257 Monolignol Biosynthesis Gene Families AT3G53260 75.875 2.52e-145 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00529 K10775 - pvy:116115347 428.328