Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00528 ATGTCAGGCATTTTCAGTTGTACCCCATTTGAAAATTTTCACAAACTTGAGATGGAATCCGTAGCTGAGACCTACAGCAATGGTGTACACGAGTCTTTGAATTTCTGCAACAGCAGTAACGTGACTGCTGACCCATTGAACTGGGGTATGATGGCAGAGTCCATGAAGGGCAGTCACCTTGACGAGGTGAAACGCATGGTTGAGGAGTACCGCAAGCCAGTGGTGAAGCTTGGTGGTAAGACCTTTACCATATCACAAGTAGCAGCAATTGCCAACCATGATGGTGGGGTGAAGGTTGAGCTCTCAGAGGAGGCTCGAGCTGGTGTCAAGGCCAGCAGTGATTGGGTCATGGACAGCATGAACAAAGGGACGGATAGCTATGGTGTCACAACTGGTTTTGGTGCGACCTCACATAGGAGAACCAAGGAAGGAGGTGCTTTGCAGAAAGAGCTAATTAGATTTTTGAATGCTGGGGTCTTTGAAAATGGGACAGAGTCTAGTCATACTCTGCCTCACACAGCCACAAGGGCAGCCATGTTGATCAGGATCAACACACTTCTTCAAGGATACTTAGGTATGAGATTTGAGATCTTAGAAGCCTTATCCAAATTTCTCAACAAAACATCACTCAATGCTTGTCACTAA 645 0.4636 MSGIFSCTPFENFHKLEMESVAETYSNGVHESLNFCNSSNVTADPLNWGMMAESMKGSHLDEVKRMVEEYRKPVVKLGGKTFTISQVAAIANHDGGVKVELSEEARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGVFENGTESSHTLPHTATRAAMLIRINTLLQGYLGMRFEILEALSKFLNKTSLNACH* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00528 214 Pfam Aromatic amino acid lyase 83 207 IPR001106 -
Pte16g00528 214 Gene3D - 35 212 IPR024083 -
Pte16g00528 214 PANTHER HISTIDINE AMMONIA-LYASE 40 208 IPR001106 -
Pte16g00528 214 SUPERFAMILY L-aspartase-like 44 207 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00528 Pte-Chr16 9194398 9205974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00528 38 206 Monolignol Biosynthesis Gene Families AT3G53260 74.556 5.03e-87 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00528 K10775 - cave:132187588 298.516