Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00512 ATGGCTCTTTCTCTTTGCATCATCACACGTCTTCTTCCTTTGTTGTTCATTATGTTTCTCACGAATACATTTTCCCATGCAAGTATTTTTGACCCTAAAAAAACAGTGCAGATTGTGAATGCCTTAGAAGATCAATCAGATCTCTCCCTCCATTGCAAATCAAAAGATGATGATCTTGGGGAGCATACTTTGAAAATAGGGCAAGATTTTCAGTTCTCCTTTCATCTGAAGTTCTTTCCACCAACAACACTTTTCTTCTGCGGATTCAAATGGCCTGCAGAACCTTATATCCACTGGTTTGATATTTATGACCAACAAAATAGACCCAGATGTGATACTGTTGATAACTTTTGTCTATGGCATGTGAAGAAAAATGGGCTGTGCAAAATTCGGACCGAAATTGGGCCTGATCTGGAATCTGGTCTAGTCAATAGGTTAAGTTTTGCAAATCCATTGACTGGACCGGACCGGACCGGACCGAATTGGATTGTAATAAGATGA 501 0.3972 MALSLCIITRLLPLLFIMFLTNTFSHASIFDPKKTVQIVNALEDQSDLSLHCKSKDDDLGEHTLKIGQDFQFSFHLKFFPPTTLFFCGFKWPAEPYIHWFDIYDQQNRPRCDTVDNFCLWHVKKNGLCKIRTEIGPDLESGLVNRLSFANPLTGPDRTGPNWIVIR* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00512 166 PANTHER - 31 129 IPR010264 -
Pte16g00512 166 Pfam Plant self-incompatibility protein S1 35 133 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00512 Pte-Chr16 8666393 8672063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00512 31 130 Carbohydrate Esterase AT3G16970 41.584 8.69e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00512 - - pcin:129297220 101.679