Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00507 ATGGCATGGAGCAATTTTGTGAACAATAAGAAGCTTGTTGCTGGGGACTCCATAGTTTATCTGAGGGCAAAGAATGGAGATCTTTGTGTTGGGATTAGGAGGGCTAGGAAAGGAATTGGTGACAGAACTAAGTACTCATCTGGGTGGAATAATCAAGCAGGTGGAAACTGGGGCTCATTGTGTGAAGGGTATTCAGCTTTTCTGACTGAGGATGAGAGGATTTCATCAACAAGAAACTGCAGTATGGGTTACAGGAGAAGGGTGACAGTTGAGTCAGTTGTTAAAGCTGTGGCACTTGCTGTCAATGGCAAGCCCTTCCAAGTCGTGTATTATCCCAGTGCAGGCACCCCAGAGTTTTGGGTTAAGGCCTCTACAGTGAGAGCTACAATGCAAATCCAGTGGTGTTTTGGGATGAGATTTTAA 423 0.4515 MAWSNFVNNKKLVAGDSIVYLRAKNGDLCVGIRRARKGIGDRTKYSSGWNNQAGGNWGSLCEGYSAFLTEDERISSTRNCSMGYRRRVTVESVVKAVALAVNGKPFQVVYYPSAGTPEFWVKASTVRATMQIQWCFGMRF* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00507 140 Pfam Auxin response factor 96 140 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte16g00507 140 Gene3D - 1 36 IPR015300 -
Pte16g00507 140 ProSiteProfiles B3 DNA-binding domain profile. 1 36 IPR003340 GO:0003677
Pte16g00507 140 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 3 140 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte16g00507 140 SUPERFAMILY DNA-binding pseudobarrel domain 3 36 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00507 Pte-Chr16 8487792 8488214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00507 3 140 B3 DNA Binding Superfamily AT4G30080 60.284 1.20e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00507 - - qsa:O6P43_005033 184.882