Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00506 ATGGAATCTATGAAGACAAACTCATGGAAAAGCACAGATTCTCAGTTATGGCATGCTTGTGCTAGTGGGGTGTCTGCTATAAAATACATGGCAGACCCTCACACAAATGAGGTGTATGTTAAAATGAGGATGACACCTCTGACTGATAATGAAGGGATTGATGAGGACGAATTTCTTTTGAAGAACATTGGATTAGAGAGTCAAGAAAAACCTGAATCTTTTGCAAAGACATTGACACAGTCAGACGCGAATAATGGTGGAGGTTTTTCTGTGCCGTGTTATTGTGCGGAGTCTATACTTCCAGTCTTGGACTACACAGCTGAGCCTCCAGTTCAAACCATTGTCGCAAAGGACATGCACGGACAGAATTAG 372 0.422 MESMKTNSWKSTDSQLWHACASGVSAIKYMADPHTNEVYVKMRMTPLTDNEGIDEDEFLLKNIGLESQEKPESFAKTLTQSDANNGGGFSVPCYCAESILPVLDYTAEPPVQTIVAKDMHGQN* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00506 123 Gene3D - 72 123 IPR015300 -
Pte16g00506 123 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 24 122 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte16g00506 123 SUPERFAMILY DNA-binding pseudobarrel domain 60 122 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00506 Pte-Chr16 8487247 8487743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00506 1 121 B3 DNA Binding Superfamily AT4G30080 47.239 1.30e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00506 - - tpra:123919517 160.999