Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00484 ATGGCAGAAGTTCTTAGAAACCCTGAGATATTGCAAAAGGCACGAAAGGAAGTGTTGGGAGTGATTGGTGCTGATGGAGAAGTCAAAGAAGGTGACATCGAAAGACTTCCATACATCAGAGCTATTGTGAAAGAGAGTCTTCGTCTTCATCCGCCTGCACCCCTAATACTGCCTTACATTGCTTCAAATGATGTCGTGATTGGTGGATTCAATATTCAAAAAGGAGATCACATCATCATAAACGCATGGTCTATTGCGAGAGATCCTAAATACTGGGACGAACCCTTGTCGTTTAAACCTGAGAGATTTTTGGGATCTGATGTTGACTACAAAGGCCAGCATTTTGAGTTCATACCATTTGGAGCAGGCAGAAGGTTATGCATAGGTATGCCACTGGCTAGTCGAATGGCTTACTTGATTCTGGCAGCTATGTTACACTCATTCGACTGGAAACTGCCAGATGGTACAGCTCATACTGACTTGGACATGAGAGAACAGTTTGGAATCACATTGAAGATGGCAGTCCCAGTTTGTGCTATTCCAGTTGCATGA 552 0.4348 MAEVLRNPEILQKARKEVLGVIGADGEVKEGDIERLPYIRAIVKESLRLHPPAPLILPYIASNDVVIGGFNIQKGDHIIINAWSIARDPKYWDEPLSFKPERFLGSDVDYKGQHFEFIPFGAGRRLCIGMPLASRMAYLILAAMLHSFDWKLPDGTAHTDLDMREQFGITLKMAVPVCAIPVA* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00484 183 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Pte16g00484 183 FunFam Predicted protein 1 179 - -
Pte16g00484 183 Pfam Cytochrome P450 2 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00484 183 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00484 183 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00484 183 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00484 183 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00484 183 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 182 - -
Pte16g00484 183 SUPERFAMILY Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00484 183 Gene3D Cytochrome P450 1 178 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00484 183 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00484 183 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00484 183 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00484 183 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00484 Pte-Chr16 7733612 7734163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00484 1 182 Cytochrome P450 AT2G45570 52.747 1.14e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00484 - - qsa:O6P43_006332 280.411