Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00478 ATGGTATTTTTGCTGTTTATATTTAGTATAACTAAAATGTTACTTTCTCTTGTCTTGCGTCACGGCTTTCCGTTTATCTGTCCTAAGAGAATATGCTTTACTTGGTTTCATCTTCTGAGATTTCCCTCTTGCTATTCTCTCGAAATATACTCGTTAGGTCATGTTAAGCTGAGTGGTCCTCACCTGTTTACTGAGGAAGCTGGTCATGGGTATGGAGTTTCTCGTTCTGGTGACAAAATGTTGGAAGATGAGAGCTGTCGGCCCTCCTTCCCAAGAGGGGAGGGTAAGTATGGCAGGAGCAGCAGGGATAGAGGTTATTTCAGCCAGAGAGATTTCAGAGGACACTCTGAAATGAGTAATGGGTCTGCAAATGTCTATAGGAGGCCGTCAGATGTCAATAATGATCCTAGGTCAGTTGCCGATGCGCATCCTTACTCACACAATTCCCATCCTGACTTTATGCACAATTGGGATAAGCAAGATAAGATGGGTAATGGGTCAGGCACTGGACAAAGATATGATAGAGAGAATGGGCTGGTTTCTATTGACTGGAAGACTCTCAAATGGAACCGTTCTGGAAGCTTGCCTTCTAGAGGTTCAGGACTAAGCCATTCAAGCAGTTCAAGGAGCAATAGGGGTGTAGATTTGGGTGAAGTGAAGACAGATGTTATAGGTAAAAGTGCGACTCCTGTTGATTCTCTTTCAGGGGATGCTACTTGTGTTACATCTTCCGCTCCATCTGATGAAACAACTTCTAGGAAAAAGCAACGTCTAGGTTGGGGTGAAGGCCTTGCAAAATACGAAAAGAAAAAAGTTGAGGCACCTGATGTGAGTGTAATCAAGGATGGTGTTGTCGTTTCTAACACTGTTTCTGAACCTAGTCCTTCTTTTGGCGTTTCCTTGGTGGATAAAAGCCCTAAACTTGCAGAATGTTCAGGTTGTGCATCTCCTGCCACTTCATCTTCTGTTGCATGTAGTTCTTCTCCAGGTGTAGAAGATAAGCTATTTGGAAAGGGTGCTAATGTTGATCATGATGTAAGTACCTCAAGTGTTTTGCCTAGCCCTCTGTCTCAGAATCATATTGAGAGTCTCCCTTTTAATCTCGAGAAACTGGATGCTGAGTCCCTGGCTACTCTACATTCTTCTATCTCTGACTTATTGCAAGAAGATGTGGGTTCTGTGGATTCTATTGCACTGACGTCTTCTGCTATGAGCAGATTGCTAATGTGGAAGGTTAAAATATCTAAAGTTCTAGAGACAACAGAGTCTGAGATTGATTTATTTGAAAATGAGTTGAGGTCATTGAGATCTGGATTAGGAGATGGTGGTTCCCATCCAGAATCATCAAATTCCCTTAAAGTTGGGGACGAAACAAACCATTCTGAAGAATATGCTGGAGATTACATTACTCCATCTCACCTGAGGAAGGTGGAAATCATTTCCCCTGGAGTGGAAAATATGGAGATTCAACCAGTTAGTAACCCTCAAAGTCATTATGAAACTGGCAAGGATGAGGACGTTGACAGTCCTGGAACAGCTACCTCAAATTTTGATGAGCCTATGGCCTTGGTTCATGTAGTTAAAGATGGTGCATGCTTGGGTAGTCTCAGCACTATTAGTTCTACCAGTTTAGAAGTGAAATGTCTTGTAACTTGTTCAAATAGGAATAATGTGAAGGCTTGTGGTGATACTGGCATTTCAGGAACAAAAGAAAGTGTTAATGCTTCTGACAGTCCCAACCAGTGTAGTAGCATAAGTAATTCTTTGTGTGATGTCATTACTGCTGCAAACAGAAAATTAGCAAACAGTGCATCTGAGATGAGTGGTATGTTATTGCGAAAAGATTGCTGTGTTGATAAGTTGGGATTCACTAGTGATATTGGCAATCAGAATGATGCCTTGATGAAAGAGAAATTTGCATCAAGGAAAAGGCTTTTGAAATTTAGAGAAATGGTTGCTGCCATTAAGTTTAGAGCTCTTCGTCACCTTTGGAAAGAAGATATTCGATTGCTCTTCAGTAAGAAATCCCGTCCAAAATCTCATAAGAAGCTTGAAATAGGGTTACGGGCGTCAGTAAGTGGTTATCAGAAGCCTCGATCTTCTGTTCGTTCTCGTATTGCTTTTCCTGCAGGAAATGTGAGCTTAGTACCTACTTCAGATATGATTGCTTTTACCAAGAAACTGCTGTCTACCTCCCAATTTAAACCCCAGAGGGGCACTTTGAAGATGCCAGAATTGATTCTGGATGATAAGGAGAAGATGGTGTCAAGATTTGTGTCTAATAATGGATTAGTAGAAGATCCCGTGGCTTTTGAGAGGGAAAGGGCCATGGTTAACCCCTGGACATCAGATGAGAGAGAAATTTTCTTGGATAAATTGGCCATTTATGGGAAGGATTTCTGTAAGATTGCTTCATTTCTCGACCATAAGACCACTGCTGATTGCGTTGAATTCTACTACAAAAATCACAAATCTGAGAGTTTTCAGAAGATAATGAAGCAGGAGAAATCATCAGTTAACGCTAAGTTGGTGTTGTCAGGTACCAAATGGAATCGAGAGACTAGTGATGCTTCTCTTGATATTTTGAGTGCTGCCTCTGCGATGGCAGGTCAAGCTGATGGCATGACAGATCAGCAGAAACTGTGGCTGGGAAGGTCTCTTCTGGGAGGATATAGTAATGTGAAGACTTCAAAATATAATTTTGTGTTGGAGAGGTCAAAATGCTTGGTTGTTCCCAGTGATGAGAGGGAGACAGTTGCAGCTGATGTATTGGCTGGTATTTCATGTTCGTTTTCGCCAGAGGGTATAAGTTCATGTATTACAAATTCTGTTGAACCTGCGGAGTATCATAGGGAGTGGAAGTGCCTGAAACTGGACTCTAATATTCAGTGTCCCCTGGTGCCTGATGCAACACAACTCATGGATGAAGAGACTTGCTCAGATGATAGTTCTGGGGAGATGGATCCGGATCCTTCTGATTGGACGGATGAGGAGAAAGCGACCTTTTTGCAGGCTGTATCATCATATGGTAGAGATTTTGCAATGATCTCTCGATGCATACGAACAAAATCAAGAGACCAGTGCAAGGTCTTCTTTAGCAAGGCTCGAAAATGCCTTGGATTAGACATCTTGCACTCTAGGTTTCAAAATGAGGGATCACCGGCGAACCATGATGGCAATGGAGGTGGGACAGATGCTGAAGATGCATGTACTGTTGATACTGGCTCTGTTGCTAGTACCAATAAATTAGGCAATGGGATGGAGGAGGTGAAGAATGTGTGTGATGATGAATCTGATCCTGTAGATGCTTGTAACTTGTCAGTTGATGGCTTGCATAAATCTGATACAGATGAACAAGGAGAACAGGATGTGGATAACATGGTTTCTGATTCGTGCACTACAAAGGATTGCTCGGAGTTGGTTTTGGACGGTGATAGCAATGTTTCATGTGGGTCTCTTAGAAAGCCTTGTTTAGTTCAGGCTGGAGATAATGAAGGCTTTTCAGAGCAGACAATTGAAGTGGGAAACATGTGTACAGAATCTCTCTCCAATACAGGTGGAGTTGAAGCTGATGCCTCTATTTTTGATATGGTTGAGAAAAATTTGGTTTCACAAGTGACGAATAGAAATGTGTTAAAGTGGAAAGAGACTGTGCCTGGAAATGGTCTAAATGGTGGAGATTATAACAAGGCTGATGCGGAAGCAAATAATGAGGTACACGACTTGAAGTGTTCAGTTCAATTTTCATTTGCAAATGGTAATGCTTTAAATCTGACTGCGGATTTACTTTGTTCAATGGAAAACCAGCAGAATGTACCTCTTAAAAAGCCTGAAGCAATATTGTTACCAGAAGAGACTTCTCATTCCACAATGAACTCAACATCAAAAAATAAAACGGATTCTCCTGATCAATTGTCATCGACTCTAGAGTTCAAGGACAGCACGACAAGGAAGAGTCATAAATATGTTCATGAATATAAGCAGCATGTTTCACGGCAATGTTTTGCAGAAAGTGTCAATCCTCCCAATATTCTTCAGGGCTGCCCATTGCAAATGAGCATCAATAATGAAGGCAGTGATGATGTCAGCTGCAACAGTTCCATTACTGAGTTACCTTTTATGTCCCAAAAGGTTGAGCAGTTCAGTGATCATTCCACAAGCAATTATGGCAGTTTTTCTGATGCAGAGAAAGCATGTAAAACTGGTGATGTGAAGCTATTTGGCAAGATATTGAGTAACCATTCTGTGCAGAAGTCAAACCTGGTTAAGAATCATGAAAGCGAGAAGGGGAGCTGTAATGAAAAGATTGGCAGTAAGTCTTCAAGCGTGAAATTCTCTAGCGCTCATAATTCGGATGGGAATTCTGCATTCTTGAAATTTGAACGTAGTAATTGTCTTGGTCTTGAAAATATCCCTATCAGGAGTCATGGGTATTGGGATGGGAACCGAATTCACACCGGGATATCTCCTATTCCTGATTCTGCTGCCTTACTTGCTAAATATCCAGCAGCATTTGGTAATTATACCACAATTAATTCAAGATTGGAACAACACTCTCCCCAAACAGTCACCAAAGTTGCTGAGCGGAGTTTGGGTGGTGTTTCTAGCTTTGGGCATAGAGAAATCAGCTGCTGCAACGGGGCGGTTGATTATGCCAAGTATAGGACCAGAGATGGTACAAAGTTGCACCAGCCATTGACGGTAGATGTTAAGCACAGGCAAGACATCTTTTGTGAGGGGCAGAGGAGGAACGGCTTTGAAGCACTTGGGAGTTTACCGCAGCAGCAGGGGAGGAATACTATTGTGGGAATGAATGGAGTTGGAAGACCGGGCATCCTTGTTGGAGGATCATGTGCAGGTGTGTCAGATCCTGTGGCAGCCATTAGAATGCATTATGCAAATATTGTAGACCAGTATGGAGGGCAGAATGGAAGCTTTTTGAGAGAGAAGGAATCATGGGGGGGCAAAGCGGAAATAAGAAGGTAG 4986 0.4214 MVFLLFIFSITKMLLSLVLRHGFPFICPKRICFTWFHLLRFPSCYSLEIYSLGHVKLSGPHLFTEEAGHGYGVSRSGDKMLEDESCRPSFPRGEGKYGRSSRDRGYFSQRDFRGHSEMSNGSANVYRRPSDVNNDPRSVADAHPYSHNSHPDFMHNWDKQDKMGNGSGTGQRYDRENGLVSIDWKTLKWNRSGSLPSRGSGLSHSSSSRSNRGVDLGEVKTDVIGKSATPVDSLSGDATCVTSSAPSDETTSRKKQRLGWGEGLAKYEKKKVEAPDVSVIKDGVVVSNTVSEPSPSFGVSLVDKSPKLAECSGCASPATSSSVACSSSPGVEDKLFGKGANVDHDVSTSSVLPSPLSQNHIESLPFNLEKLDAESLATLHSSISDLLQEDVGSVDSIALTSSAMSRLLMWKVKISKVLETTESEIDLFENELRSLRSGLGDGGSHPESSNSLKVGDETNHSEEYAGDYITPSHLRKVEIISPGVENMEIQPVSNPQSHYETGKDEDVDSPGTATSNFDEPMALVHVVKDGACLGSLSTISSTSLEVKCLVTCSNRNNVKACGDTGISGTKESVNASDSPNQCSSISNSLCDVITAANRKLANSASEMSGMLLRKDCCVDKLGFTSDIGNQNDALMKEKFASRKRLLKFREMVAAIKFRALRHLWKEDIRLLFSKKSRPKSHKKLEIGLRASVSGYQKPRSSVRSRIAFPAGNVSLVPTSDMIAFTKKLLSTSQFKPQRGTLKMPELILDDKEKMVSRFVSNNGLVEDPVAFERERAMVNPWTSDEREIFLDKLAIYGKDFCKIASFLDHKTTADCVEFYYKNHKSESFQKIMKQEKSSVNAKLVLSGTKWNRETSDASLDILSAASAMAGQADGMTDQQKLWLGRSLLGGYSNVKTSKYNFVLERSKCLVVPSDERETVAADVLAGISCSFSPEGISSCITNSVEPAEYHREWKCLKLDSNIQCPLVPDATQLMDEETCSDDSSGEMDPDPSDWTDEEKATFLQAVSSYGRDFAMISRCIRTKSRDQCKVFFSKARKCLGLDILHSRFQNEGSPANHDGNGGGTDAEDACTVDTGSVASTNKLGNGMEEVKNVCDDESDPVDACNLSVDGLHKSDTDEQGEQDVDNMVSDSCTTKDCSELVLDGDSNVSCGSLRKPCLVQAGDNEGFSEQTIEVGNMCTESLSNTGGVEADASIFDMVEKNLVSQVTNRNVLKWKETVPGNGLNGGDYNKADAEANNEVHDLKCSVQFSFANGNALNLTADLLCSMENQQNVPLKKPEAILLPEETSHSTMNSTSKNKTDSPDQLSSTLEFKDSTTRKSHKYVHEYKQHVSRQCFAESVNPPNILQGCPLQMSINNEGSDDVSCNSSITELPFMSQKVEQFSDHSTSNYGSFSDAEKACKTGDVKLFGKILSNHSVQKSNLVKNHESEKGSCNEKIGSKSSSVKFSSAHNSDGNSAFLKFERSNCLGLENIPIRSHGYWDGNRIHTGISPIPDSAALLAKYPAAFGNYTTINSRLEQHSPQTVTKVAERSLGGVSSFGHREISCCNGAVDYAKYRTRDGTKLHQPLTVDVKHRQDIFCEGQRRNGFEALGSLPQQQGRNTIVGMNGVGRPGILVGGSCAGVSDPVAAIRMHYANIVDQYGGQNGSFLREKESWGGKAEIRR* 1662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00478 1661 CDD SANT 994 1032 IPR001005 -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 193 258 - -
Pte16g00478 1661 ProSiteProfiles SANT domain profile. 989 1040 IPR017884 -
Pte16g00478 1661 SUPERFAMILY Homeodomain-like 990 1040 IPR009057 -
Pte16g00478 1661 Gene3D - 757 829 - -
Pte16g00478 1661 SMART sant 777 825 IPR001005 -
Pte16g00478 1661 SMART sant 990 1038 IPR001005 -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 113 131 - -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 489 513 - -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 1286 1314 - -
Pte16g00478 1661 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 53 1656 - -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 438 458 - -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 193 214 - -
Pte16g00478 1661 Gene3D - 961 1051 - -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 76 111 - -
Pte16g00478 1661 Coils Coil 418 438 - -
Pte16g00478 1661 ProSiteProfiles SANT domain profile. 776 827 IPR017884 -
Pte16g00478 1661 FunFam Metastasis-associated 1 family, member 3 776 837 - -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 976 995 - -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 1286 1312 - -
Pte16g00478 1661 Pfam Myb-like DNA-binding domain 992 1033 IPR001005 -
Pte16g00478 1661 SUPERFAMILY Homeodomain-like 764 826 IPR009057 -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 74 173 - -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 976 993 - -
Pte16g00478 1661 MobiDBLite consensus disorder prediction 232 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00478 Pte-Chr16 7575214 7582348 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte16g00478 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00478 - - qsa:O6P43_005056 1446.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00478 16 7575214 7582348 Pte16g00478 16 7575214 7582348 RCT