Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00471 ATGGGGAAGAGATCAAACTTGTTCACTGCAGTGAAGAAGGTTCTCCATCATGAATCTTTGGAGAAGAAGGCTCAGAATGGTAGTCAATCAAAACAATCGGCTCCGATTTTGTTGTCCAAGGAGGAAGCAATGGCAGCTTCTCCCCTTCTTACACCGATAGAGGATGTGAAGCAAGCCGAGGCCGAGAATGAGCAGAGCAAGCCTGGATTTACTGTGTCACTCGCCGGTGGCGTTGGTGGAGCACAGGCTGCTGCACAGATTGCTGAAGGGGTGGTTCCTCTCGCTCCCGTAGCCCATTATCGTGGAAAGTCAAAGGAAGATGTAGCAGCTATCAAAATCCAGACGGCTGCCAGAGGATACATGGCAAGAGGGGCATTTCGGGACATGAAAAGTTTGGAGAGGCTAAAAACGTTGATACAAGGGAAAACTGTTCAAAGGCAAGCGACAGCTACATTAAAACGCATGCATTCTATTGCTCAGCTTCACTCTCAGATTCAAGCAAGGAGGATTAGAATGTCAGAGGAAAACCATGCTCTCCAGCGCCAACTTCATCAGAGACATGTAAAAGAACGAGTGGAGTCCCCAACATCTGTAATCCAGGGTGGATGGAGCAATAGCCCCCAATCAAAGGAGCAAATAGAAGCAACTCAACTGTACAAGCAAGAAGCTGCTATGCGAAGAGAAAGAGCTTTGGCGTACGCACATTCACAACAGCAAACTTGGAAGAATGCTTCAAAATCTGCGAATTCAACTTTGATGGATCCAAACAACCCTCAATGGGGTTGGAGTTGGATGGAACGATGGATGGCAGCCCGGCCATGGGAGAACCGAATCCCCATTGATCATCTTGACCACGCCTCAACAAGGACTAGCGCAGCAGGTCATGCCCCTTCTGTTTCAGAAATCAACAGACCACGTTCTCTTCGTGAGATCAGCCATGGTACTAAGCCTTCCCCTGCTGGAAAAGGGTTAAGCCGATCTCTCACTTGCCTTCCACCTTCAACTGTATCCTCAAAGGCTACAACTTCATCATCTGTTGCTGGAAAGACAAAGCCCTCAAATCACAAAGCAATTGTTCCATCGGGTGGTGGTGATGACTCCAACTCCAACACCAAGTGTAAGGACAGTGTTCAGTCGAAGCACACGAGAAGACATAGCATAGGACAATCCTATGGGTTTGAAGACAACAGTCCTGCTAGCTCACCGGTACATCCAGGTCGCATGGTGCGCACACAGGAGTCAGCTAGGGCAAAGTCTAAGTCATTGAACTCAATGGAGTTTGAGAAAAATGGAATGCTAGAGAAGGCTTCAGTAAGTACTGCAAAGAAAAGACTCCCCATCTCAGATTCTCAAGCAACTGGTTCAAGGAGACATTCTGAGCCTGCCAGAAGCGGATAA 1398 0.48 MGKRSNLFTAVKKVLHHESLEKKAQNGSQSKQSAPILLSKEEAMAASPLLTPIEDVKQAEAENEQSKPGFTVSLAGGVGGAQAAAQIAEGVVPLAPVAHYRGKSKEDVAAIKIQTAARGYMARGAFRDMKSLERLKTLIQGKTVQRQATATLKRMHSIAQLHSQIQARRIRMSEENHALQRQLHQRHVKERVESPTSVIQGGWSNSPQSKEQIEATQLYKQEAAMRRERALAYAHSQQQTWKNASKSANSTLMDPNNPQWGWSWMERWMAARPWENRIPIDHLDHASTRTSAAGHAPSVSEINRPRSLREISHGTKPSPAGKGLSRSLTCLPPSTVSSKATTSSSVAGKTKPSNHKAIVPSGGGDDSNSNTKCKDSVQSKHTRRHSIGQSYGFEDNSPASSPVHPGRMVRTQESARAKSKSLNSMEFEKNGMLEKASVSTAKKRLPISDSQATGSRRHSEPARSG* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00471 465 PANTHER IQ-DOMAIN 5-RELATED 1 461 - -
Pte16g00471 465 MobiDBLite consensus disorder prediction 443 459 - -
Pte16g00471 465 MobiDBLite consensus disorder prediction 383 397 - -
Pte16g00471 465 MobiDBLite consensus disorder prediction 328 351 - -
Pte16g00471 465 MobiDBLite consensus disorder prediction 184 210 - -
Pte16g00471 465 MobiDBLite consensus disorder prediction 288 465 - -
Pte16g00471 465 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
Pte16g00471 465 SMART iq_5 105 127 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00471 Pte-Chr16 7476618 7479138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00471 1 463 IQD Protein Family AT5G03040 39.917 9.73e-79 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00471 - - pop:7489631 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00471 16 7476618 7479138 Pte16g00471 16 7476618 7479138 RCT