Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00462 ATGGAATACCGAGTGAAAACTGACACATTAACACCACCAGTTTCCAACGACGTTGTTCAAACTGCTAATATGTTTCTAGCCACCTCTACTTGGTCTCCAACATCTTCATCTTTTAGTACTCACTTGTCCCCAACAACTATTTCTTCTTCTAATTGTTCACAGGAGTCTTCTCCAACAGGCGTGCCTGTTGTTGTTAGCCCTTGTGCAGCCTGCAAGATCCTGCGTCGAAGATGTGCTGAGAAATGTGTTTTAGCTCCATATTTCCCTCCCACCGATCCATTCAAGTTCACCATTGCTCACAGAGTCTTTGGAGCTAGCAATATCATCAAGTTCTTGCAGGAACTCCCAGAGGCTCAGAGAGCAGATGCAGTCAGCAGCATGGTTTATGAAGCCAATGCCAGAATAAGAGACCCAGTGTATGGCTGTGCTGGAGCAATATTTCAACTCCAGAAACAAGTGAGTGAGCTGCAAGCACAGTTAGCCAAAGCCCAAGCAGATGTTGTGAACATGCAATGCCAGCAAACCAACCTAGTGGCTCTGCTTTGCATGGAGATGAGTCAGTCACAAGATCTACAGATGTTTCAGCCACAATCTCACTCACATCAAGACATGACATGTTTCTTGGACGAAAATTTGGGCTCTGCTTGGGAGCCACTTTGGACATGA 666 0.4565 MEYRVKTDTLTPPVSNDVVQTANMFLATSTWSPTSSSFSTHLSPTTISSSNCSQESSPTGVPVVVSPCAACKILRRRCAEKCVLAPYFPPTDPFKFTIAHRVFGASNIIKFLQELPEAQRADAVSSMVYEANARIRDPVYGCAGAIFQLQKQVSELQAQLAKAQADVVNMQCQQTNLVALLCMEMSQSQDLQMFQPQSHSHQDMTCFLDENLGSAWEPLWT* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00462 221 ProSiteProfiles LOB domain profile. 66 167 IPR004883 -
Pte16g00462 221 Pfam Lateral organ boundaries (LOB) domain 67 164 IPR004883 -
Pte16g00462 221 Coils Coil 146 173 - -
Pte16g00462 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 65 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00462 Pte-Chr16 7206679 7208190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00462 63 221 AS2 family AT1G07900 69.939 2.64e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte16g00462 LOB 3.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00462 - - gmx:100806667 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00462 16 7206679 7208190 Pte16g00462 16 7206679 7208190 RCT