Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00456 ATGCCAGCAGTTTTTGGAGGTGTTGAAACACCCAATGGAGACCCCTCAGATGAACCTGCTTCTTCTAAACACCCCCCTCAAGATTCTCGGGACTTGCCATCTTTATTTTCCTCCTCTTATCCAATTACTCTCAAGTTCATGGACGTGAGTTATAAAGTAAAGATAGACAAGAAACACAAAGGAAGTAGTGTTATTAAGCGTGTGCTGAGTTGTGGTCCTTCGCCGTCGGATGAGAGATCAACGGCTAGAGATAAAGAACGAACCATATTAAATGGCATCACAGGCATGGCATCTCCAGGTGAAATCCTGGCCATCCTTGGCCCATCAGGCAGTGGAAAATCAACTCTTCTGAATGCAATTGCAGGAAGACTCAATGGACATGGCTTCACTGGAACAGTCTTAGCAAACGTCCGCGAAACCTTGGTTTTCTGTTCACTTCTTTGTCTTCCCAAAACTCTCACCAAGACAGAGAAAATCTCCGTAGCGGAGTCTGTTATCTCAGAGCTCGGTTTGTCAAAATGTGAGAACACAATCATAGGCAACAGCTTCATTCGTGGGGTGTCAGGTGGTGAAAGAAAAAGAGTGAGCATTGGACATGAGATGCTGATCAATCCAAGCATGCTGATATTGGATGAACCAACGTCTGGACTTGACTCCACAGCTGCATGTAGGTTGGTGACAATGTTGGTGTCTTTAGCTCAAAAAGGGAAGACAATAGTAACCTCCATGCATCAACCATCTAGCAGGGTGTATCAAATGTTTGATTCAGTTTCGGTGTTGTCTGAGGGTCGGTGTTTGTATTTTGGGAAAGGAAATGAAGCCTTGAGCTATTTTGAGTCCGTTGGCTTCATCCCTTCTTTTCCCATGAACCCTGCGGATTTTCTGCTTGATCTTGCTAACGGTGTCTTCCAAATTGATGGAGCATATGACAGGTCCAATGTAAGGCAAAACCTTATTCATTCCTACCACACACAGTTAGCTCCAAAGGGACTTGGTCTAGCATTAGGTGCAGCCATCATGGATGCTAAGCAAGCATCCAGAGTGGTAACTGTTACTATGTTGGCATTTGTGTTGACAGGTGGATGTTATGTGCATAAAGTAGGGGTGAGCATATACCGGATTGGTCCGGATTCGGGGTCAATCCGGAACCAATCCGGACCGACGGATTTTAAGTTTTTCCAACCCAATCCGGTCAACGGATTGGTCAACGGATCGGATTGA 1221 0.4529 MPAVFGGVETPNGDPSDEPASSKHPPQDSRDLPSLFSSSYPITLKFMDVSYKVKIDKKHKGSSVIKRVLSCGPSPSDERSTARDKERTILNGITGMASPGEILAILGPSGSGKSTLLNAIAGRLNGHGFTGTVLANVRETLVFCSLLCLPKTLTKTEKISVAESVISELGLSKCENTIIGNSFIRGVSGGERKRVSIGHEMLINPSMLILDEPTSGLDSTAACRLVTMLVSLAQKGKTIVTSMHQPSSRVYQMFDSVSVLSEGRCLYFGKGNEALSYFESVGFIPSFPMNPADFLLDLANGVFQIDGAYDRSNVRQNLIHSYHTQLAPKGLGLALGAAIMDAKQASRVVTVTMLAFVLTGGCYVHKVGVSIYRIGPDSGSIRNQSGPTDFKFFQPNPVNGLVNGSD* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00456 406 SMART AAA_5 99 264 IPR003593 GO:0016887
Pte16g00456 406 Gene3D - 133 281 IPR027417 -
Pte16g00456 406 Pfam ABC transporter 91 215 IPR003439 GO:0005524
Pte16g00456 406 Gene3D - 69 132 IPR027417 -
Pte16g00456 406 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 287 IPR003439 GO:0005524
Pte16g00456 406 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 136 - -
Pte16g00456 406 Pfam ABC-2 type transporter 244 307 IPR043926 GO:0140359
Pte16g00456 406 MobiDBLite consensus disorder prediction 1 35 - -
Pte16g00456 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00456 Pte-Chr16 6846548 6850789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00456 89 292 Calmodulin-binding Proteins AT2G36910 27.193 2.00e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00456 K05681 - qsa:O6P43_004081 459.144