Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00432 ATGGAGGATACGCGTGAAGATCAGGAGCTTTTGAAGCTTACCCTTGCAGTTGTCGTCACAGATTCCGGTGAGGAGAGGAAGAGGAAGATTAGCAAAAGAAAAAGGAGCGCTATTGCTTTGAGTTCTTCCTTTGAAGGGTATGAAGGGAAGGTATTCTGGCTACTGCAAATGAGGGAGCAGATGATCAAACAAGACCAGAAAAGGAAAGTGGTTGCAGCAGAAAATGGAAACGGTCTTCATCTGATCCATCTCTTGCTCTTGACAGCAACAGAAATTGACGAAAACAATGAGGAAATGGCGTTGGAGAATCTGAGAGAGCTCTATCAAAGTGTATCTCTATCTGGAGATTCAGTCCAAAGGGTTGTGGCATATTTTGCAGATGGATTAGCAGCTAGACTCCTCACCAGAAAATCTCCATTCTACGAGATGCTAATCAAGGAACCTGCAGGTGAAGAAGAGTTCTTGGCCTTCACTGACCTTTACAAGGTTTCACCGTACTATCAATTCGCTCATTTCACAGCAAACCAAGCGTTAATGGAGGCATTTGAGAGTGAGGAGCAATGGAACAACCGAGCCTTACATGTTGTGGACTTTGATGTCTCCTATGGCTTTCAATGGCCTTCTCTTATTCAATCACTCTCAGAAAAGGCATCAAGTAACAATAGAATATCACTAAGGATAACGGGGTTTGGAAAAAACATGGAGGAACTCCAAGAAACTGAATCCAGATTGGTCAGTTTCGCAAAGGGTTTTCGAAACGTCGTCTTTGAATTCCAGGGCTTGTTGAGAGGATCCAAGCTTGGAGGCATAAGGAGAAGGAAAAATGAAACAGTGGCAGTAAACTTGGTTTTCCATTTGAACACATTGGTCAGCTATTCCAAGATATCTGACACATTGAAAGTTGTACATTCCCTTTTCCCATCTGTTGTGACCTTGGTGGAACAAGAAGGTAGTAGAAGTGCAAAGAGCTTCCTGTCAAGATTCATGGAGTCTCTTCCGTACTTTGCAGCATTGTTTGATTCATTGGATGATTGTCTCCCACTTGACAGTACTGACAGATTGGGAATAGAGAAGAATCTTCTTGGCAAAGAGATCAAAACTACACTCAACTCTGATGTGGATTCTTCAAACTGTCCAAAGTATGAGAAGATGGAAACATGGAAGGCAAGAATGGAAAGCCATGGATTTTCAGGAGTTAAGATAAGCTCAAAATCTATAATTCAAGCAAAGCTGCTTCTGAAGATGAGAACTCAACATTGTCCAATCCAAATTGACAGAGAAGGTGGTGGTGGGTTTAGAATTACTGAAAGAGATGACGGAAATGCTCTCTCTTTAGGTTGGCAAGATAGGTTTCTGCTCACTGCCTCTGCATGGCACTGTATCTGA 1386 0.4242 MEDTREDQELLKLTLAVVVTDSGEERKRKISKRKRSAIALSSSFEGYEGKVFWLLQMREQMIKQDQKRKVVAAENGNGLHLIHLLLLTATEIDENNEEMALENLRELYQSVSLSGDSVQRVVAYFADGLAARLLTRKSPFYEMLIKEPAGEEEFLAFTDLYKVSPYYQFAHFTANQALMEAFESEEQWNNRALHVVDFDVSYGFQWPSLIQSLSEKASSNNRISLRITGFGKNMEELQETESRLVSFAKGFRNVVFEFQGLLRGSKLGGIRRRKNETVAVNLVFHLNTLVSYSKISDTLKVVHSLFPSVVTLVEQEGSRSAKSFLSRFMESLPYFAALFDSLDDCLPLDSTDRLGIEKNLLGKEIKTTLNSDVDSSNCPKYEKMETWKARMESHGFSGVKISSKSIIQAKLLLKMRTQHCPIQIDREGGGGFRITERDDGNALSLGWQDRFLLTASAWHCI* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00432 461 ProSiteProfiles GRAS family profile. 72 459 IPR005202 -
Pte16g00432 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 67 454 IPR005202 -
Pte16g00432 461 Pfam GRAS domain family 81 458 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00432 Pte-Chr16 6237941 6239326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00432 84 458 GRAS Transcription Factor Family AT2G04890 34.115 1.81e-57 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte16g00432 GRAS 7.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00432 - - vvi:100242818 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00432 16 6237941 6239326 Pte16g00432 16 6237941 6239326 RCT