Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00430 ATGCAAATGGGCAACGCCGTCGTTTCAAAGCGTTCTCGTAGCCGCCGGAGGTCTACCATGGCTGCTTCCTCTTCCGGCTCTGTCGTCTCTGCACCTTCTCCTTTTCACGACGATCCTCCTAGTAGAATCACTCTCACACCTGATCAAGTGCAGTGCTGCACCGAAGCACTCAAGTCATTGAACCAGAAGCTCCAATCACCTGTAGCTATTTTGCAAGAGTTTGGTCATCTGCAGGCATGTAGGATAACAGCATCTGAAATGAAGAGAAGGTGTTCTGTAGCTCTTGATGGCGTGAATCTTGACAAAAACCGATATAATGATGTCTTACCATTCGACCAGAATAGGGTTGTTCTTGAATCAAGTACAGATTACCGGCCTTCTGCACGTGGCTACATCAATGCTAGCTTCATCAATACTTCCTCTGTTGCAAGCATTTCTCAGTTTATAGCCACACAAGGTCCTCTACCACACACCTTCGAAGATTTCTGGGCAATGGTCATCCAGTATCATAGCCCTGCTATTGTGATGCTCACCAGATTGGTCGACAATTTTAAGATGGTGAAATGTGATGATTATTTTCAAGCTGAAGATGGGTCCCGAGAATTTGGTAATATATCTATTTGCACTAAATGGATGAAAACTACTGATACGTCATTAGTGCTTCGCCATTTGGAAGTGAAGCATAAAGAGTCAGAGGAAGCATCCCTTTCTGTTCTTCATATTCAGTATCCTGATTGGCCTGACCATGGGGTTCCCAAGGACACTCTTGCTGTTCGTGAAATTTTTAGAAGATTACACCATTTGCCAGCAACTGCTGGCCCTGTAGTGGTGCACTGCAGTGCAGGTATTGGGAGAACGGGAACATATTGTGCTATTCACAACACTATTCAAAGAATCCTTGCTGGCGATATGTCTGCCCTTGATCTAGCTAATACAATAAGTGTCTTCAGATCTCAGAGAATTGGAATGGTTCAAACACAGGATCAATATATTTTTTGCTATAAAGCTATTATAGAGGAACTGGAATACCTTCTCTCCAATCAATGA 1047 0.4365 MQMGNAVVSKRSRSRRRSTMAASSSGSVVSAPSPFHDDPPSRITLTPDQVQCCTEALKSLNQKLQSPVAILQEFGHLQACRITASEMKRRCSVALDGVNLDKNRYNDVLPFDQNRVVLESSTDYRPSARGYINASFINTSSVASISQFIATQGPLPHTFEDFWAMVIQYHSPAIVMLTRLVDNFKMVKCDDYFQAEDGSREFGNISICTKWMKTTDTSLVLRHLEVKHKESEEASLSVLHIQYPDWPDHGVPKDTLAVREIFRRLHHLPATAGPVVVHCSAGIGRTGTYCAIHNTIQRILAGDMSALDLANTISVFRSQRIGMVQTQDQYIFCYKAIIEELEYLLSNQ* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00430 348 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 57 343 IPR029021 -
Pte16g00430 348 ProSitePatterns Tyrosine specific protein phosphatases active site. 277 287 IPR016130 GO:0016311|GO:0016791
Pte16g00430 348 Pfam Protein-tyrosine phosphatase 99 339 IPR000242 GO:0004725|GO:0006470
Pte16g00430 348 CDD PTPc_plant_PTP1 131 334 - -
Pte16g00430 348 Gene3D Protein tyrosine phosphatase superfamily 44 343 IPR029021 -
Pte16g00430 348 SMART ptp_7 237 339 IPR003595 -
Pte16g00430 348 MobiDBLite consensus disorder prediction 1 43 - -
Pte16g00430 348 ProSiteProfiles PTP type protein phosphatase domain profile. 70 340 IPR000242 GO:0004725|GO:0006470
Pte16g00430 348 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 62 343 - -
Pte16g00430 348 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 259 331 IPR000387 GO:0016311|GO:0016791
Pte16g00430 348 SMART PTPc_3 69 342 IPR000242 GO:0004725|GO:0006470
Pte16g00430 348 PRINTS Protein tyrosine phosphatase signature 148 168 IPR000242 GO:0004725|GO:0006470
Pte16g00430 348 PRINTS Protein tyrosine phosphatase signature 274 292 IPR000242 GO:0004725|GO:0006470
Pte16g00430 348 PRINTS Protein tyrosine phosphatase signature 130 137 IPR000242 GO:0004725|GO:0006470
Pte16g00430 348 PRINTS Protein tyrosine phosphatase signature 236 253 IPR000242 GO:0004725|GO:0006470
Pte16g00430 348 PRINTS Protein tyrosine phosphatase signature 323 333 IPR000242 GO:0004725|GO:0006470
Pte16g00430 348 PRINTS Protein tyrosine phosphatase signature 307 322 IPR000242 GO:0004725|GO:0006470
Pte16g00430 348 FunFam Tyrosine-protein phosphatase non-receptor type 12 47 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00430 Pte-Chr16 6147399 6152675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00430 48 344 Protein tyrosine phosphatase (PTP) family AT1G71860 67.340 1.43e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00430 - - qsa:O6P43_004106 501.13