Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00408 ATGGAGGATACGCGTGAAGATCAGGAGCTTTTGAAGCTTACCCTTGCAGTTGTCGTCACAGATTCCGGTGAGGAGAGGAAGAGGAAGATTAGCAAAAGAAAAAGGAGCGCTATTGCTTTGAGTTCTTCCTTTGAAGGGTATGAATGGAAGGTATTCTGGCTACTGCAAATGAGGGAGCAGATGATCAAACAAGACCAGAAAAGGAAAGTGGTTGCAGCAGAAAATGGAAACGGTCTTCATCTGATCCATCTCTTGCTCTTGAGAGCAACAGAAATTGACGAAAACAATGAGGAAATGGCGTTGGAGAATCTGAGAGAGCTCTATCAAAGTGTATCTCTATCTGGAGATTCAGTCCAAAGGGTTGTGGCATATTTTGCAGATGGATTAGCAGCTAGACTCCTCACCAGAAAATCTCCATTCTACGAGATGCTAATCAAGGAACCTGCAGGTGAAGAAGAGTTCTTGGCCTTCACTGACCTTTACAAGGTTTCACCGTACTATCAATTCGCTCATTTCACAGCAAACCAAGCAATAATGGAGGCATTTGAAAGTGAGGAGCAATGGAACAACCGAGCCTTACATGTTGTGGACTTTGATGTCTCCTATGGCTTTCAATGGCCTTCTCTTATTCAATCACTCTCAGAAAAGGCATCAAGTAACAATAGAATATCACTAAGGATAACGGGGTTTGGAAAAAACATGGAGGAACTCCAAGAAACTGAATCCAGATTGGTCAGATTCGCAAAGGGTTTTCGAAACGTCGTCTTTGAATTCCAGGGCTTGTTGAGAGGATCCAAGCTTGGAGGCATAAGGAGAAGGAAAAATGAAACAGTGGCAGTAAACTTGGTTTTCCATTTGAACACATTGGACAGCTATTCCAATTAA 885 0.4271 MEDTREDQELLKLTLAVVVTDSGEERKRKISKRKRSAIALSSSFEGYEWKVFWLLQMREQMIKQDQKRKVVAAENGNGLHLIHLLLLRATEIDENNEEMALENLRELYQSVSLSGDSVQRVVAYFADGLAARLLTRKSPFYEMLIKEPAGEEEFLAFTDLYKVSPYYQFAHFTANQAIMEAFESEEQWNNRALHVVDFDVSYGFQWPSLIQSLSEKASSNNRISLRITGFGKNMEELQETESRLVRFAKGFRNVVFEFQGLLRGSKLGGIRRRKNETVAVNLVFHLNTLDSYSN* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00408 294 Coils Coil 87 107 - -
Pte16g00408 294 Pfam GRAS domain family 81 289 IPR005202 -
Pte16g00408 294 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 65 289 IPR005202 -
Pte16g00408 294 ProSiteProfiles GRAS family profile. 72 294 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00408 Pte-Chr16 5721773 5722657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00408 77 289 GRAS Transcription Factor Family AT2G01570 33.040 7.75e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte16g00408 GRAS 2.1e-51 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00408 - - pvy:116104885 393.275