Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte16g00407 | ATGGAGTCTCTTCCGTACTTTGCAGCATTGTTTGATTCATTGGATGATTGTCTCCCACTTGACAGTACTGACAGATTGGGAATAGAGAAGAATCTTCTTGGCAAAGAGATCAAAACTACACTCAACTCTGATGTGGATTCTTCAAACTGTCCAAAGTATGAGAAGATGGAAACATGGAAGGCAAGAATGGAAAGTCATGGATTTTCAGGAGTTAAGATAAGCTCAAAGTCTATAATTCAAGCAAAGCTGCTTTTGAAGATGAGAACTCAACATTGCCCAATCCAAATTGACAGAGAAGGTGGTGGTGGGTTTAGAATTACTGAAAGAGATGACGGAAATGCTCTCTCTTTAGGTTGGCAAGATAGGTTTCTGCTCACTGCCTCTGCATGGCACTGTATCTGA | 402 | 0.408 | MESLPYFAALFDSLDDCLPLDSTDRLGIEKNLLGKEIKTTLNSDVDSSNCPKYEKMETWKARMESHGFSGVKISSKSIIQAKLLLKMRTQHCPIQIDREGGGGFRITERDDGNALSLGWQDRFLLTASAWHCI* | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte16g00407 | 133 | PANTHER | OSJNBA0084A10.13 PROTEIN-RELATED | 2 | 127 | IPR005202 | - | |
Pte16g00407 | 133 | Pfam | GRAS domain family | 1 | 130 | IPR005202 | - | |
Pte16g00407 | 133 | ProSiteProfiles | GRAS family profile. | 1 | 131 | IPR005202 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte16g00407 | Pte-Chr16 | 5721269 | 5721670 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte16g00407 | 1 | 132 | GRAS Transcription Factor Family | AT1G50420 | 38.636 | 2.86e-19 | 80.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GRAS | Pte16g00407 | GRAS | 1e-22 | CL0063 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte16g00407 | - | - | palz:118035514 | 212.231 |