Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00366 ATGGGCAACCTAACCCTTGTAGCTTCTTCTTTCGGTTTCCTCTGTTTCTTCAGTCAACCCTTGCAAAGTTTCTCTCTTTCTCTTTCTCGCTTTGCTTTCATCCCCATACGGCGACACCCCTTCTGTCAAAATCCCACCTTTATTTTCTCTGTCAGACGACAAGTTTGCTTTTTTCCATCATCATCTTTATTCTTCATGGATCGTGGCCTTCAAGCTGTCGTTGCTGCTCTTGCAACCTTCGTCGCCGTGACCCTTTTTATCTCTCTCTCGGTTCTTGTCTGCAAACGGTGGAACCAGCGAACCCAACGAAGAAGGTCTGAACCCAGAGCTCAAACATGGCCCCGGCCCGTAACAGAGATCTCATCCATCACTGTTGATGAAAGCCGATCGTTTGACCCATATATGATGATCTCCTTGGCTGAGTTAGCTACTGCAACGAAGAACTTCTCGCCTGACCTGATCGTTGGGGACGGCAGTTTTGGGCTTGTCTACAAGGCGGTGCTCTCAAACGATGTCGTCGTAGCAGTGAAGAAGCTTGACCCGGATGCCTTTCAAGGGTTCAGAGAGTTTCGGGCCGAAATGGAAACTTTGGGTAAGCTCCGACACCCGAATTTAGTTAAAATTCTTGGATATTACGCGTCAGGCTCTGACAGGCTTTTAGTATACGAGTTCATGGTAAGAGGTAGTCTCGACTACTGGTTGCACGACACGTTTCCAACCGAACATGAAGATAGTTCTGGTTTACGGTTACCGTTATCTTGGGAGGCGAGGACTAAGATTGTAAAGGGCGTAGCTAATGGGCTGTGTTATTTACATGGGCTGGAAAAGCCCATTATACATAGAGACATCAAGGCTAGTAATGTGTTATTGGACTCAGAATTTGAGGCCCACATTGCGGATTTTGGGCTTGCAAGGAGAATTGATAACTCCCATTCTCATGTGTCTACCCAAGTGGCCGGAACCATAGGGTATATGCCGCCAGAGTACAGGGAAGGAATCACGGTGGCAACGGTGAAGGCGGATGTATATAGCTTTGGAATGTTGATGTTGGAAACGGGGACGGGTCAGCGACCCAATTTGCCGGTTGTTCTGGACCGTAAGGATGTCGGGCTGGTCGAATGGGCTAGATTAATGATGGCCCGAAATGATCATATGAAAATGCTAGACATTAAAATTTTGCAACTAGGATTAGATGAAGAAAAAGTGAAAGAGTACTTTGAGATTGCTTGCAAGTGTACATGTGAAATACCCAAAGAAAGACCTGTAATGTTGGATATTCTTGAGATGCTAAGTCGAATTTAA 1302 0.4616 MGNLTLVASSFGFLCFFSQPLQSFSLSLSRFAFIPIRRHPFCQNPTFIFSVRRQVCFFPSSSLFFMDRGLQAVVAALATFVAVTLFISLSVLVCKRWNQRTQRRRSEPRAQTWPRPVTEISSITVDESRSFDPYMMISLAELATATKNFSPDLIVGDGSFGLVYKAVLSNDVVVAVKKLDPDAFQGFREFRAEMETLGKLRHPNLVKILGYYASGSDRLLVYEFMVRGSLDYWLHDTFPTEHEDSSGLRLPLSWEARTKIVKGVANGLCYLHGLEKPIIHRDIKASNVLLDSEFEAHIADFGLARRIDNSHSHVSTQVAGTIGYMPPEYREGITVATVKADVYSFGMLMLETGTGQRPNLPVVLDRKDVGLVEWARLMMARNDHMKMLDIKILQLGLDEEKVKEYFEIACKCTCEIPKERPVMLDILEMLSRI* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00366 433 FunFam Phytosulfokine receptor 2 112 224 - -
Pte16g00366 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Pte16g00366 433 Gene3D Transferase(Phosphotransferase) domain 1 225 433 - -
Pte16g00366 433 Gene3D Phosphorylase Kinase; domain 1 116 224 - -
Pte16g00366 433 Pfam Protein tyrosine and serine/threonine kinase 155 430 IPR001245 GO:0004672|GO:0006468
Pte16g00366 433 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Pte16g00366 433 ProSiteProfiles Protein kinase domain profile. 149 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00366 433 FunFam Phytosulfokine receptor 2 225 433 - -
Pte16g00366 433 CDD STKc_IRAK 155 433 - -
Pte16g00366 433 SUPERFAMILY Protein kinase-like (PK-like) 130 430 IPR011009 -
Pte16g00366 433 SMART serkin_6 149 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00366 433 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 68 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00366 Pte-Chr16 4963772 4965542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00366 42 434 Receptor kinase-like Gene Family AT5G07280 38.780 1.63e-79 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pte16g00366 PK_Tyr_Ser-Thr 5.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00366 - - qsa:O6P43_008077 502.286