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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pte16g00364
ATGTCTCACAGGAAGTTCGAGCACCCCAGGCACGGGTCTCTGGGATTTCTTCCCAGGAAGCGAGCTTCTCGTCAAAGAGGAAAAGTGAAGGCCTTCCCTAAGGATAATCCCGCTGAGAAATGCAGGCTCACTTCCTTCTTGGGATACAAGGCTGGCATGACTCATATCGTCAGGGAGGTCGAGAAGCCTGGTTCCAAGCTTCACAAGAAGGAGACATGTGAAGCAGTCACTATTATTGAGACTCCTCCCATGGTCATTGTTGGTGTTGTGGGCTATGTCAAGACTCCTCGAGGTCTTCGCACCCTGAACACTGTCTGGGCTCAGCACCTGAGTGAGGAGGTTAGGCGCAGGTTTTACAAGAACTGGTGCAAGTCTAAGAAGAAGGCTTTTACCAAGTATTCCAAGCAGTATGAAACCCCTGAAGGGAAGAAGAACATTGAAGCCCAGCTTGAGAAGATCAAGAAGTATGCATCTGTTGTTCGTGTCTTGGCTCACACTCAGATTAGGAAAATGAAGGGACTGAAGCAGAAGAAAGCACATCTCATGGAAATTCAGGTTAATGGTGGTACAATTGCCCAGAAAGTTGACTATGCTTACAGTTTCTTTGAGAAGCAAGTCCCAGTTGATACTGTTTTCCAGAAGGATGAGATGATTGACATCATTGGTGTGACAAAGGGTAAAGGTTATGAGGGTGTTGTTACTCGTTGGGGTGTCACCCGTCTTCCTCGCAAAACCCACAGAGGTCTGCGAAAGGTAGCTTGTATTGGTGCTTGGCATCCTGCTAGAGTTTCTTTCACTGTTGCTAGGGCTGGTCAGAATGGTTATCACCACAGAACTGAAATGAACAAGAAGATCTACAAGCTTGGCAAGACTGGTCAGGAATCCCACACAGCTCTTACTGAGTTTGACAGGACTGAGAAAGACATAACTCCAATGGGAGGCTTCCCTCACTACGGTATTGTAAAGGATGATTATCTGTTGATCAAGGGGTGCTGCGTTGGACCAAAGAAGAGAGTTGTAACTCTGCGTCAGTCTCTAGTTAAGCAGACATCTCGATTGGCTCTTGAAGAGATCAAACTCAAGTTTATTGATACATCCTCAAAGTTTGGCCATGGCCGCTTCCAGACCACACAAGAGAAACAGAAGTTCTATGGAAGGGTGAAGGCATAA
1170
0.4667
MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDNPAEKCRLTSFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETPEGKKNIEAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYSFFEKQVPVDTVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKTGQESHTALTEFDRTEKDITPMGGFPHYGIVKDDYLLIKGCCVGPKKRVVTLRQSLVKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRVKA*
390
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pte16g00364
389
Gene3D
Ribosomal protein L3, domain 3
1
274
IPR044892
-
Pte16g00364
389
FunFam
Ribosomal protein L3
265
389
-
-
Pte16g00364
389
FunFam
60S ribosomal protein L3
83
207
-
-
Pte16g00364
389
Pfam
Ribosomal protein L3
1
370
IPR000597
GO:0003735|GO:0005840|GO:0006412
Pte16g00364
389
SUPERFAMILY
Translation proteins
4
370
IPR009000
-
Pte16g00364
389
ProSitePatterns
Ribosomal protein L3 signature.
212
235
IPR019926
-
Pte16g00364
389
Gene3D
-
83
207
-
-
Pte16g00364
389
MobiDBLite
consensus disorder prediction
1
34
-
-
Pte16g00364
389
FunFam
60S ribosomal protein L3
44
137
-
-
Pte16g00364
389
PANTHER
60S RIBOSOMAL PROTEIN L3-RELATED
1
384
IPR045077
GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pte16g00364
Pte-Chr16
4896695
4899094
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pte16g00364
1
387
Cytoplasmic Ribosomal Protein Gene Family
AT1G43170
86.305
0.0
699
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pte16g00364
K02925
-
mof:131162349
753.821
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Pte16g00364
16
4896695
4899094
Pte16g00364
16
4896695
4899094
RCT
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