Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00353 ATGGGTGGGAAGAAGCCTACTGCACGAAATGACGATGCTGCCGCTCAAGCAGGGGGAAAGTCTAAGAAGAAGCAACTTGTTATTGATGATGATGAGTATTCTATTGGTACCGACCTTTCAGAAGAGCCACAGCCGGTTCAGGAGGAGAAGGTTGTGATTACTGGCAAAAAGGGTAGGAAGGATAATGCAAAAGGGTCACAGTTGCTAGAAGAGGACGACTTAGATAAGGTGGTGGAGGATGCTGTAGATGAGGCTGTTTTGGATGGAAAGAAGGGCAAGTCCAAAAAGGATATGGTTGAGGATGCTGAAGAAGAGAGTGTGGTTGAGGATGATGAACCGGTGATTTCTTTCACTGGAAAAAAGAAGTCAACAAAGGGTGGAAAGAAGGGCGGTAGTTCGTTTACAGCTTTTAGTTCTGTTGGGACTTATGAAGATGGGGACAAGGATGATAGTGCTGATACTGATGAATCAGTTATTGCTTTCACAGGGAAGAAGAAGTCTTCGAAGGGTAGCAAAAAAGGTGGTAGTAGCGTCTTTACAGCTGTTAGTATCGATGCTCTCCATGAAGATGATGACAGGGTAGAAAACAAAGATGAGGATGATGATGCTCCTATCAACTTCTCAGGGATGAAGAAGTCATCGAAGTCTTCAAAGAAGAGTGCTGGTGCCGAACTTGCTGATGAGGGCAATGTTAAAGATGGATCATCGTCAAAACCTGGTTTGGAAACTAATGACGTTATTGAAGATGATGGCAATTTTGGAATTGCATTTACCGGAAAGAAGAAAAAATCTTCCAAGAAGAAAGGCACCTGTACGTATGCTGCATTGGATGATGAATCTGAGATTGGAAATGAAAGCCTTGATGTAATTGAACCTGAGCAAACAAATGGAAAAATCGTTAGACCTGATTCTGACGGGTCCAAAGTCAACAAGAATGAAGAAGCAACTGAAGTTTCGAAAAATAAGAAAAATAAGAAGAAAAAGAGCGGGAGAACTGCCCAAGAGGAGGAGGATTTGGACAAGATTCTTGCAGAGCTTGCCGAGGCTCCTCCTCCTCAAGAGAAGAAAGCTGAGGCGCCTTCTGAAGCAGCTGTTCCTGTTGATGCTTCTGCACAAAAAGAAGTTGAAGAAAAAGAAGATGAGACTGTCGAGTCTGCAGCAGCAAAGAAGAAAAAAAAGAAAAAGGAGAAGGAAAAGGAGAAGAAGGCAGCAGCTGCTGCTGCAGTTACAGGTTCTACAAATAAAGATGAGAAGGAAGAAGAAATGAAAATGGAGACACTGGAAGCAAAAAAGAGTGATGGAAAGACTAAAGCGGCTGACAAGAAGCTACCCAAGCATGTTAGGGAGATGCAAGAAGCTCTCGCTCGGAGAAAAGAAGCTGAAGAAAGGAAGAAAAGGGAAGAGGAGGAGAGGTTGAGGAAAGAAGAGGAGGAGAGACAAAGACAGGAGGAACTTGAGAGGCAAGCAGAAGAGGCTAGACGCAGGAAAAAGGAAAGAGAAAAGGAGAAGCTTCTAAAGAAGAAACAGGAAGGTAAATTATTAACTGGTAAGCAGAAGGAGGAAGCTCGGCGCTTGGAGGCTATGAGGAAGCAGTTTCTCGCTAGTGCAGGGGATGTACCACTTCCAGCTCCAGAGTCAAATGCTCCTTCCAAAAGACCCATATATAAAACAAAGAAGTCAAAATCTAGCCACCATCAATCAAATGGAACTGCTTCTGCTAAGGTAATTGAAAACATAGAAGCAACAGGAAATGAAGAAGCAGAGAAAACTGAAGTGGAGTCTGAAAAAGCTCAAGAGGTGGAACCAGATAAGGTTGAAGATGTGGATTCGCTTGATGTGGAGGACAACATTGAAGCTTCCGAGGCTACAGAAGATGTTATGGAAGAAGATGATGCCGGGGATGATTGGGATGCCAAGAGCTGGGATGATGTTGATCTACCATCTACAAGTGCATTTGCTGATGAGGAGGTTGACTCCAAGCCTAAGGTTGTTGGTAAAAAGGAGATGAAGAATGCAGCACCAACTTCACGTGGTGCAGCACCTCCAATCTCTACTAAGAAAACTGCTCCCTCTAAGAATGAGGTTGAGGAAATGAAAGATAAGAAGCAACCTGAGAGAGAAGCTGCTGAGAAAACAAAACGACCTTCTTCAAAGAGGGAAATGTTAAATTCTGAAGCGACTACAGAACTTAAAGAAGATTCAGGGAAGAGTGAAGCTGACCTTCGCTCTCCCATATGCTGCATAATGGGCCATGTCGACACAGGGAAAACCAAACTTCTCGATTGCATCCGAGGTACCAATGTTCAGGAAGGTGAGGCTGGTGGTATTACACAGCAGATTGGTGCCACATACTTCCCTGCCGAGAATATACGTGAGAGGACAAAAGAGCTAAAAGCTGATGCAAAACTTAAAGTCCCGGGCCTGTTGGTCATTGACACCCCCGGACACGAGTCATTTACAAACTTGCGTTCACGTGGTTCAGGATTATGTGATATTGCAATTTTGGTTGTTGATATCATGCATGGCTTGGAGCCACAAACGATAGAATCTCTCAATCTTTTGAAAATGAGGAGCACGGAATTCATTGTTGCATTGAATAAGGTTGACAGACTGTATGGTTGGAAAACATGTAGAAATGCTCCAATCCGCAATGCAATGAAGCAACAATCTAAGGATGTCATTAATGAGTTCAATATGAGGTTGGCCCAGATTATCACACAATTCAAGGAACAAGGATTAAATACAGAATTATATTACAAGAACAAAGAAATGGGAGAAACTTTTAGTATTGTGCCAACAAGTGCCATAAGTGGTGAAGGTATCCCAGATCTCTTATTGTTGTTGGTTCAATGGACCCAAAAAACCATGGTTGAGAAGCTCACCTACAGTGATGAAATGCAGTGTACTGTTTTGGAGGTGAAAGTCGTTGAAGGCCATGGGACTACCATTGATGTTGTCTTGGTCAATGGTGTGCTTCATGAAGGAGATCAAATAGTTGTTTGTGGAATGCAGGGTCCTATTGTCACGTCAATTCGAGCTTTATTGACTCCCCATCCAATGAAGGAACTTCGGGTCAAGGGCACTTATCTCCACCATAAGGAAATCAAGGCTGCAATGGGTATTAAAATTACTGCACAGGGCCTTGAGCATGCTATTGCTGGCACTAGTCTTTATGTAGTAAGGCCTGAGGATGATCTAGATGATATAAAGGAGGAAGCTATGGAAGATATGGAGTCAGTTTTTAGTAGGATTGACAAGAGTGGTGAGGGGGTTTGTGTACAGGCATCTACCCTAGGTTCACTTGAAGCATTGCTTGAGTTTCTGAAGTCCCCAGCAGTAAATATACCTGTTAGTGGTATAAACATAGGCCCTATTCATAAGAAGGATGTCATGAAGGCTGGTGTTATGCTTGAAAAGAAAAAGGAGTATGCCACAATTCTGGCATTTGATGTGAAAGTTACTCCTGAAGCCCGTGAACTTGCAGACGAAATGGGTGTGAGAATTTTCCTTGCAGATATCATTTACCATTTGTTTGATCAATTTAAAGCCTACATAGACAACCTAAAGGAGGAAAGAAAGAAGGAAGCTGCTGACGAGGCTGTTTTCCCATGTGTTCTAAAAATCTTACCCAACTGCATTTTCAATAAGAAGGACCCAATTGTATTGGGTGTCGATGTTCTTGAGGGAATTGCCAAGGTAGGAACTCCGATGTGTATTCCTAGTAGAGAGTTTATTGATATTGGTCGCATTTCCTCAATTGAGGCTAACCATAAAGCTGTCGATATTGCTAAGAAAGGACAACAAGTAGCAATCAAGATACAAGGTACAAATTCTGAAGAGCAACAGAAGATGTATGGAAGGCACTTTGACATCGAGGATGAGCTTGTGAGTCGCATCTCGAGAAGATCCATTGATCTATTAAAAGCCAATTACAGGGATGACCTAACGCTTGAGGAGTGGAAGCTGGTTGTGAAATTGAAGAGTCTTTTCAAAATCCAATGA 4002 0.4273 MGGKKPTARNDDAAAQAGGKSKKKQLVIDDDEYSIGTDLSEEPQPVQEEKVVITGKKGRKDNAKGSQLLEEDDLDKVVEDAVDEAVLDGKKGKSKKDMVEDAEEESVVEDDEPVISFTGKKKSTKGGKKGGSSFTAFSSVGTYEDGDKDDSADTDESVIAFTGKKKSSKGSKKGGSSVFTAVSIDALHEDDDRVENKDEDDDAPINFSGMKKSSKSSKKSAGAELADEGNVKDGSSSKPGLETNDVIEDDGNFGIAFTGKKKKSSKKKGTCTYAALDDESEIGNESLDVIEPEQTNGKIVRPDSDGSKVNKNEEATEVSKNKKNKKKKSGRTAQEEEDLDKILAELAEAPPPQEKKAEAPSEAAVPVDASAQKEVEEKEDETVESAAAKKKKKKKEKEKEKKAAAAAAVTGSTNKDEKEEEMKMETLEAKKSDGKTKAADKKLPKHVREMQEALARRKEAEERKKREEEERLRKEEEERQRQEELERQAEEARRRKKEREKEKLLKKKQEGKLLTGKQKEEARRLEAMRKQFLASAGDVPLPAPESNAPSKRPIYKTKKSKSSHHQSNGTASAKVIENIEATGNEEAEKTEVESEKAQEVEPDKVEDVDSLDVEDNIEASEATEDVMEEDDAGDDWDAKSWDDVDLPSTSAFADEEVDSKPKVVGKKEMKNAAPTSRGAAPPISTKKTAPSKNEVEEMKDKKQPEREAAEKTKRPSSKREMLNSEATTELKEDSGKSEADLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRSTEFIVALNKVDRLYGWKTCRNAPIRNAMKQQSKDVINEFNMRLAQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSDEMQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTSLYVVRPEDDLDDIKEEAMEDMESVFSRIDKSGEGVCVQASTLGSLEALLEFLKSPAVNIPVSGINIGPIHKKDVMKAGVMLEKKKEYATILAFDVKVTPEARELADEMGVRIFLADIIYHLFDQFKAYIDNLKEERKKEAADEAVFPCVLKILPNCIFNKKDPIVLGVDVLEGIAKVGTPMCIPSREFIDIGRISSIEANHKAVDIAKKGQQVAIKIQGTNSEEQQKMYGRHFDIEDELVSRISRRSIDLLKANYRDDLTLEEWKLVVKLKSLFKIQ* 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00353 1333 FunFam Eukaryotic translation initiation factor 5B 1083 1189 - -
Pte16g00353 1333 Gene3D Translation factors 964 1084 - -
Pte16g00353 1333 FunFam eukaryotic translation initiation factor 5B 964 1083 - -
Pte16g00353 1333 SUPERFAMILY Translation proteins 1200 1332 IPR009000 -
Pte16g00353 1333 NCBIfam small GTP-binding protein domain 746 872 IPR005225 GO:0005525
Pte16g00353 1333 Coils Coil 378 408 - -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 371 391 - -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 186 206 - -
Pte16g00353 1333 Gene3D - 1085 1189 IPR036925 -
Pte16g00353 1333 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 420 1330 IPR015760 -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 413 528 - -
Pte16g00353 1333 Pfam Elongation factor Tu GTP binding domain 745 953 IPR000795 GO:0003924|GO:0005525
Pte16g00353 1333 Pfam Elongation factor Tu domain 2 980 1058 IPR004161 GO:0005525
Pte16g00353 1333 Gene3D - 735 963 IPR027417 -
Pte16g00353 1333 CDD IF2_eIF5B 744 954 - -
Pte16g00353 1333 FunFam Eukaryotic translation initiation factor 5B 735 963 - -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 1 67 - -
Pte16g00353 1333 CDD IF2_aeIF5B_IV 1204 1299 - -
Pte16g00353 1333 CDD aeIF5B_II 967 1075 - -
Pte16g00353 1333 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 741 957 IPR000795 GO:0003924|GO:0005525
Pte16g00353 1333 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1066 1195 IPR036925 -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 304 321 - -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 329 344 - -
Pte16g00353 1333 FunFam Eukaryotic translation initiation factor 5B 1196 1333 - -
Pte16g00353 1333 Gene3D Translation factors 1196 1333 - -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 690 736 - -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 52 67 - -
Pte16g00353 1333 Pfam Translation-initiation factor 2 1069 1182 IPR023115 -
Pte16g00353 1333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 742 1032 IPR027417 -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 89 154 - -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 581 604 - -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 605 638 - -
Pte16g00353 1333 Coils Coil 443 509 - -
Pte16g00353 1333 MobiDBLite consensus disorder prediction 186 736 - -
Pte16g00353 1333 PRINTS GTP-binding elongation factor signature 825 836 IPR000795 GO:0003924|GO:0005525
Pte16g00353 1333 PRINTS GTP-binding elongation factor signature 861 870 IPR000795 GO:0003924|GO:0005525
Pte16g00353 1333 PRINTS GTP-binding elongation factor signature 809 819 IPR000795 GO:0003924|GO:0005525
Pte16g00353 1333 PRINTS GTP-binding elongation factor signature 745 758 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00353 Pte-Chr16 4655042 4662817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00353 1 1334 Eukaryotic Initiation Factors Gene Family AT1G76810 60.748 0.0 1211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00353 K03243 - zju:107427478 1412.9