Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00351 ATGGAGGTCCACATCTCAGCCTCGCTTGGCCTCCCATCTCCAAAACTCTATCAAATTTCAAATCAGTCTGATTACCCTGGGATCTTGAACCATTTCAGCACTCTCTTAACAGCTTCTCAACTTGACTCTTCAAAAACTGCTCCTGCCGTAGTCAATTTCCCATTTGCTTCAACCTCCATTTCCACCGAGACCCAAATTGCACCCAAGTTCAAAAATTGTCTCAAACCCAGTTCAAGAACCAGGAACAAAGTTCAAACCCTGATGAAAAATCTCACCGTCCTTGAACGTGCCCTCATTGGAGCAGCTGGTGGTGGTATAGCTGGGGGCTTTACATATGTATGCCTCCTCCCACTCGACTCCATCAAAACTAAGATGCAAACAAAAGGTGCGTCTCAGATTTATAAGAATGCATTTGATGCTGTTGTTAAGACTTTTCAATCAAAGGGTATTGCTGGATTTTATAGTGGAATCTCGGCTGTAATTGTGGGTTCAGCTGCATCTTCTGCTGTGTATTTTGGGACTTGTGAGTTTGGGAAATCGATTTTATCTAAATTTGATGAGTTCCCATCTGTGCTTATACCACCAGCGGCTGGGGCAATGGGGAATATTGTATCATCTGCTATAATGGTGCCTAAGGAGTTGATAACTCAGAGAATGCAAGCTGGGGCTAAGGGAAGGTCGTGGCAAGTTTTACTGAGAATTTTAGAGAAAGATGGTTTTTTGGGTCTATATGCAGGTTACTCTGCTACACTGCTCAGGAATTTGCCTGCTGGGGTGTTAAGTTATTCATCATTCGAGTATTTGAAAGCCGCAGTGTTAAGTAGGAAGAAGCAAGATAATTTAGAGCCAATACAAAGTGTGATTTGTGGGGCATTAGCTGGGGCAATATCTGCTTCACTTACAACACCACTTGATGTTGTAAAAACAAGATTGATGACTCAAGTTCATGGAGAGGCTATAAATAAGGTCTCCGCTGCAATGTACGGTGGGGTTTCATCAACTGTGGAACAGATTTTGAAGGAAGAAGGATGGGTTGGGTTGACTAGAGGAATGGGTCCTCGAGTTCTTCACAGTGCATGTTTCTCAGCTATAGGCTACTTTGCATTTGAGACAGCAAGGCTGACCATATTGCATCAGTATCTCAAGCGGAAGGAATTACCTGGGACGTCTGCGGTTCCTTAA 1182 0.4349 MEVHISASLGLPSPKLYQISNQSDYPGILNHFSTLLTASQLDSSKTAPAVVNFPFASTSISTETQIAPKFKNCLKPSSRTRNKVQTLMKNLTVLERALIGAAGGGIAGGFTYVCLLPLDSIKTKMQTKGASQIYKNAFDAVVKTFQSKGIAGFYSGISAVIVGSAASSAVYFGTCEFGKSILSKFDEFPSVLIPPAAGAMGNIVSSAIMVPKELITQRMQAGAKGRSWQVLLRILEKDGFLGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLSRKKQDNLEPIQSVICGALAGAISASLTTPLDVVKTRLMTQVHGEAINKVSAAMYGGVSSTVEQILKEEGWVGLTRGMGPRVLHSACFSAIGYFAFETARLTILHQYLKRKELPGTSAVP* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00351 393 SUPERFAMILY Mitochondrial carrier 98 370 IPR023395 -
Pte16g00351 393 Gene3D Mitochondrial carrier domain 225 391 IPR023395 -
Pte16g00351 393 Gene3D Mitochondrial carrier domain 9 224 IPR023395 -
Pte16g00351 393 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 66 386 - -
Pte16g00351 393 FunFam protein MITOFERRINLIKE 1, chloroplastic 227 392 - -
Pte16g00351 393 FunFam Protein MITOFERRINLIKE 1, chloroplastic 69 226 - -
Pte16g00351 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 95 181 IPR018108 -
Pte16g00351 393 Pfam Mitochondrial carrier protein 196 272 IPR018108 -
Pte16g00351 393 Pfam Mitochondrial carrier protein 102 184 IPR018108 -
Pte16g00351 393 Pfam Mitochondrial carrier protein 281 376 IPR018108 -
Pte16g00351 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 271 IPR018108 -
Pte16g00351 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 281 375 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00351 Pte-Chr16 4600791 4602344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00351 197 373 Chloroplast and Mitochondria Gene Families AT1G07030 29.121 3.82e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00351 K15111 - qsa:O6P43_004216 558.14