Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00317 ATGCACAGCATCAAAACGCTTGAACCAACTCTTGTCCTCCCATCCCACCCTCCCTTTGAAGAAAGCCGTCTACTCTCTCTCTCACACATAGATACAGACACCAACCTTAACTCCACTTTTCGTTACCTTCGTGTCTATGTTTCCACCACAGAAAACGACGACAACGACAGTTCCAATGAACCCTTTCCTGTCATTTCTAAAGCTCTCTCCGCTGCCCTTGTGCACTACTATCCTCTTGCCGGTACTCTCCGGCACAGACACCATGACCAGCGACTTGTGGTGTCATGCACTGCAGGTCAGGGTGTCCCTTTTGTTTTAGCAAACGGAGACTGCACACTTGAGCAACTTAATTACCTTGATGATGCGGATCCAGACATTTTGGAAAAGTTGGTGCCTGACCCGAACCCAGACGAGGGAATGGTCCACCCTTGCATGCTGCAAGTGACGATGTTCAAGTGTGGTGGGTTCACTCTTGGGACTGCCATGCACAACTCAATCTGTGATGGACTTGGTGCTGGTCAGTTCTTTACCACAGTGGCTGAGTTGGCTCGTGGGGAGACTGAGATCAAGTTAAAACCAATTTGGGACCGTGAGAAGCTGTTGGGGCCTCGTAACCCGCCCAGAGTTGAAGCTCCAATTATCCAATCATTCTTGAATTTGGACAAGGGATTTTCACCTTACAAACAGGATGTCGGAAATGTTGTCAAGAAATGTTTTCATGTGAAGGATGAGCGCTTGGAACAGTTCAAATCAAAACTAGAAGAACAGTCAGGGTTAAAGTTCACAACTTTTGAAGCACTGGGTGCATATATATGGAGATCCAAAGTTGAAGCTTCTGGGGTTGTTGATAATGATTTAGTCAAATTTGCATACTTGATTAATGTGAGGAAACTGGTGAGGCCACCCTTGCCAGTTGGGTATTGGGGTAATGGATGTGTGGTCATGTATGTTCAATTGAGAGCAAAAGATTTGGTTGAGAAACCAATATGGGAAACAGCTGAGCTAATCCAGAAGAGTAAAGGCAATGTGACTGATGAGTATGTTCGGTCTTTCATTGATTTTCAAGAGTTGCATTTTGGTGATGGGATCACAGCAGGGAAAGGAGTTAGTGGGTTCACAGATTGGAGGCACTTGGGACATTCATCATTGGATTTTGGATGGGGAGGTCCTGTAAATGTGTTGCCACTTTCAAGGAACTTACTTGGGAGTGTGGATCCTTGTTTTTTCTTGCCTTATTCAACATCAAGTGTGACAAAGAAAGATGGGTTTAAGGTTTTGATCACTTTGGCAGAGAATGCATTGCCAACTTTCCAAAAACACATGGAGTTGTTTGCAAGTTAG 1341 0.4497 MHSIKTLEPTLVLPSHPPFEESRLLSLSHIDTDTNLNSTFRYLRVYVSTTENDDNDSSNEPFPVISKALSAALVHYYPLAGTLRHRHHDQRLVVSCTAGQGVPFVLANGDCTLEQLNYLDDADPDILEKLVPDPNPDEGMVHPCMLQVTMFKCGGFTLGTAMHNSICDGLGAGQFFTTVAELARGETEIKLKPIWDREKLLGPRNPPRVEAPIIQSFLNLDKGFSPYKQDVGNVVKKCFHVKDERLEQFKSKLEEQSGLKFTTFEALGAYIWRSKVEASGVVDNDLVKFAYLINVRKLVRPPLPVGYWGNGCVVMYVQLRAKDLVEKPIWETAELIQKSKGNVTDEYVRSFIDFQELHFGDGITAGKGVSGFTDWRHLGHSSLDFGWGGPVNVLPLSRNLLGSVDPCFFLPYSTSSVTKKDGFKVLITLAENALPTFQKHMELFAS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00317 446 PANTHER ACYL TRANSFERASE 4 3 444 - -
Pte16g00317 446 Gene3D - 224 442 IPR023213 -
Pte16g00317 446 Pfam Transferase family 4 443 - -
Pte16g00317 446 Gene3D - 1 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00317 Pte-Chr16 4176362 4177934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00317 64 441 Monolignol Biosynthesis Gene Families AT5G48930 30.711 9.26e-42 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00317 - - qsa:O6P43_012737 661.759