Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00309 ATGATTATTCCCGAGAAGAATCGTAAGGAGATCTGCAAGTACCTCTTCCGAGAGGGGGTTTGCTATGCCAAAAAGGATTATAATCTGGCAAAGCATCCTGAAATAGAAGTTCCAAATCTGCAAGTGATCAAGCTTATGCAGAGCTTTAAATCTAGAGAGTATGTGCGGGAGACCTTTGCCTGGATGCATTACTACTGGTATCTAACAAATGCTGGAATTGATTTCTTGAGGACCTACCTCAATCTCCCATCTGAAATTGTTCCGGCGACACTGAAAAAATCAGCCAAGCCTGCTGGCAGACCATTTGGAGGCCCTCCTGGTGATCGTCCTCGTGGCCCTCCTCGCTTTGAGGGTGGTTCAAGGTTTGGTGATCGGGATGGATACCGTGGAGGTCCAAGAGCGCCCCCTGGTGAGTTTGGAGGGGAAAAGGGAGGCGCTCCTGCTGATTTCCAGCCATCATTTAGGCAAGGTGGCAGGCCTGGATTTGGCCGTGGTGGTGGTGGTGGTTACGGTGCACCTCCAAGCTCCAGCTTCACTTAA 540 0.5019 MIIPEKNRKEICKYLFREGVCYAKKDYNLAKHPEIEVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNAGIDFLRTYLNLPSEIVPATLKKSAKPAGRPFGGPPGDRPRGPPRFEGGSRFGDRDGYRGGPRAPPGEFGGEKGGAPADFQPSFRQGGRPGFGRGGGGGYGAPPSSSFT* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00309 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 174 IPR037447 -
Pte16g00309 179 FunFam 40S ribosomal protein S10 1 104 - -
Pte16g00309 179 MobiDBLite consensus disorder prediction 114 128 - -
Pte16g00309 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
Pte16g00309 179 Gene3D - 1 104 IPR036388 -
Pte16g00309 179 MobiDBLite consensus disorder prediction 93 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00309 Pte-Chr16 3975262 3977513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00309 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 82.166 4.16e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00309 K02947 - qsa:O6P43_008154 288.885