Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00305 ATGGCGGCCGGGATGTTCATCGGTATGATCCCTAAACCATTTCGTCTATTTCAAACCTCACAAATCTTACCGAAACGCACCTCCACTCTGGTTCTCACTCCCTTGCGCCTTCGACGCAGCACAACCCCGAAGAGCAGAAAAATGAGTACTTTCACTGTTGTTGTTATGATGGAGGATAAAAGACAGGGTGGCCAGATCACGCAACCTTCTAAAGAAGTCCCTGATAATGTTAATTCTGAAATAATATCCCCAAGAATAGAAGAAAAAATGGATAGAAAGAGATCTGAGAGGCTTACTTATCTTATTGCTGCTGTGATTTCTAGCTTTGGCATTTCTTCCTTGGCCGCCATGTCAGTTTATTATAGATTCTTATGGCAAATGGAGGGTGGCGAGGTGCCTTTGTCAGAAATGTTTGGCACATTTGCTCTCTCTGTTGGTGCTGCGGTGGGTATGGAGTTTTGGGCTAGATGGGCACACAGAGCTCTTTGGCATGCTTCGTTGTGGCATATGCACGAGTCCCACCATCGACCCAGAGAAGGTCCCTTCGAGCTTAACGATGTCTTCGCCATCATCAACGCTTTTCCAGCAATAGGCCTCCTCTCCTATGGTTTCTTCCACAAGGGCCTTTTCCCTGGTTTCTGCTTTGGGACTTGGTATTACAGTGTTTGGAATGGCCTACATGTTTGTCCACGATGGTCTTGTTCACAAGAGATTCCCAGTGGGGCCCATAGCCAACGTGCCCTATTTGAGAAGGGTTGCTGCTGCTCACCAGGATCTGACAGTCAAGATTTTGTGGCTTATTTTCAGCTTCATCATTCAGACAAATTCAACGGTGTCCCATATGGGTTGTTCCTGGGACCTAAGGAACTTGAGGAAGTAGGAGGACTAGAAGAGTTGGAAAGGGAAATCAGCAGAAGAGTAGAATCATATAAACGACAGCGTTTATGA 948 0.462 MAAGMFIGMIPKPFRLFQTSQILPKRTSTLVLTPLRLRRSTTPKSRKMSTFTVVVMMEDKRQGGQITQPSKEVPDNVNSEIISPRIEEKMDRKRSERLTYLIAAVISSFGISSLAAMSVYYRFLWQMEGGEVPLSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAFPAIGLLSYGFFHKGLFPGFCFGTWYYSVWNGLHVCPRWSCSQEIPSGAHSQRALFEKGCCCSPGSDSQDFVAYFQLHHSDKFNGVPYGLFLGPKELEEVGGLEELEREISRRVESYKRQRL* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00305 315 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 265 310 IPR045019 GO:0016491
Pte16g00305 315 Coils Coil 296 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00305 Pte-Chr16 3937838 3939811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00305 1 217 Chloroplast and Mitochondria Gene Families AT4G25700 58.150 3.20e-85 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00305 K15746 - qsa:O6P43_008161 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00305 16 3937838 3939811 Pte9g00379 9 4371315 4373250 RCT
Pte16g00305 16 3937838 3939811 Pte16g00305 16 3937838 3939811 RCT