Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00299 ATGGATACCAAAAATTTCTACTCTATTCTTCTCGTTTTCCTCCTCCTTCACTTGCGTTCATCAAATTCATTCGTTCCCTTGGATAACTACCTTATCAGCTGTGGGTCACAAAGCAATTCTTCACTCTTCAACAGACTTTTTGTTGGTGACGCCAGTAAAACCGGCTCAGGTTTTTCCTTTCCAGATGGGTCCATTTCACTCACAGACAAAAACCCACCTCCAAATTCTCCTACTTTGTACCATAGTGCTAGAGTTTTCACTGCCATGTCGAGCTACAGGTTGAACATCAAGGGAAACGGTACCCACTTGATACGTTTTCATTTCTCACCTTTTGTTGCTCAAGGCTTTAATTTGTCATCAGCAAGGTTTAATATTTTGGCGAATGGGTTTCTGCTTCCTAGTAATTTTGATGGAAATAATGGTACAGTACTTATGGAGTTTATACTTAAGGTTGATGCCAATGTGCTTGAAATTATCTTTGAACCTTCGGGTGATTCTGGTTTTGGTTTTGTTAATGCCTTGGAGGTTTTTTCTGCTCCTGTGGATCTTATAACTGACTATGGAGCTAGGTTGATTAGTTCTTCTGGAATTGAAGAGTACAAGAACCTCACAGCTCAGGTTTTAGAGACCGTTCATAGAATTAATGTGGGAGGCTCCAAATTGACTCCTTTTAATGATACTCTTTGGAGGACATGGATCCCTGATGATGAATTTCTTGTATTCAAACCAGCTGCTAAGCGTGCTTCGACTACTCATCCTCCATATTATCAGAAGGGTAGTGCAACTAAAGAGGCAGCACCTGATAATGTTTATATGACATGCCAGGAAATGAATAGAGATAATACAAGTTTGAGTTCCAAATTCAATATAACTTGGAATTTTCCTGTGAATAAAGGCAGGGATAGGTACTTGGTTAGGTTGCATTTCTGTGATATTGTTAGTCCTGTACTAAATGTGCTGTATTTTGATGTGTACATCAATGGGTATTATGCGTATAAGGATCTTGATTTGTCATCACTCACAATTCATTTGCTTTCATCACCAGTCTATGTAGATTTCATCATAGATTCCCACGATTCAGGTGTCATAGAAGTAAGCGTTGGTCCTTCTGATCTGAGCAGTTCTTTGAGGATGAATGCCATATTGAATGGCGCAGAGATTATGAAGATTGTTGATGTTGTGAATTCTCATGTTGTATCTAAGAAGAAAAAGATTGGGGTGCTGGTAGGTTCCATTGTTGGAGGTGTTCTTGTTTTATGTTTCGCTTTCGCGCTTCTCTTTGCTTTGAAATGCAAGAAGAAGAAACTGAAACGAAGGCCAACTGGAAGTTCGGGTTGGACAGCATTGCGAGTCTTTGGAGCTAGTTCACGTACTAGAACATCTGAAGGAACAACCTATGCATCTCCAAATCCAAATGGATATTTTGCTTTGAAAATACCCTTTGCTGATGTCCAATTCGCTACAAACAATTTTGACAAAAATCTGATCATAGGTTCTGGTGGCTTTGGCACGGTATACAAAGGGGTTCTCAAAGATAATACTAAGGTTGCAGTTAAGAGGGGTATGCCCGGCTCAAGGCAGGGCCTCCCTGAATTCCATACTGAAATAACAGTTCTGTCCAAAATCCGCCACCAGCATCTTGTATCACTGGTGGGATACTGTGAAGAGCTGTCGGAGATGATTCTAGTGTATGAATACGTGGAGAAGGGACCTCTGAAGAAGCATTTGTATGGTTCAACACTTCCAAAACTATCTTGGAAGCAGAGGCTTGAAATATGTATTGGAGCAGCGAGAGGTTTGCATTATCTTCACACCGGTTTCACACAAGGAATCATTCACCGTGACATTAAATCAACCAACATTCTGCTTGATGAAAACTATGTTGCAAAAGTTGCTGATTTTGGTCTTTCAAGATCTGGTCCATGTCTCGATGAAACTCATGTCAGTACTGGTGTGAAAGGTAGTTTCGGATATCTCGATCCCGAGTATTTCAGGAGGCAGCAGCTGACAGATAAATCAGATGTATATTCTTTAGGAGTTGTGCTTTTTGAAGTTCTTTGTGCCAGACCTGCTGTAGATCCCTTGCTTTCTAGGGATCAAGTCAATTTAGCAGAATGGGCACTAGAGTGGCAACAGAAAGGCATGGTGGACCAGATCATTGATCGCAATATTGTCGGGCAGATCAAACCGAACTGTTTGAAGAAATTTGTTGAAACAGCTGAAAAATGTTTGAATGAATATGGTGTTGATAGGCCAACAATGGGTGATGTTCTGTGGAATCTGGAGTATGCTCTTCAGCTTCAGGAAAGCGGAAGGCAAATAGAACAGCAAGCAGAATCCGAAAGTAATGTGTCAGATATTGAAACCTCTGGTAATCCCCATGGAGCTAGCTGCTTAAGAACAGAGGCAGAAGATGGCACTGGGAGTTCAGACATAAGTACCACCCGAGTTTTTTCTCAATTGATAACTAATGAAGGCAGGTAG 2484 0.409 MDTKNFYSILLVFLLLHLRSSNSFVPLDNYLISCGSQSNSSLFNRLFVGDASKTGSGFSFPDGSISLTDKNPPPNSPTLYHSARVFTAMSSYRLNIKGNGTHLIRFHFSPFVAQGFNLSSARFNILANGFLLPSNFDGNNGTVLMEFILKVDANVLEIIFEPSGDSGFGFVNALEVFSAPVDLITDYGARLISSSGIEEYKNLTAQVLETVHRINVGGSKLTPFNDTLWRTWIPDDEFLVFKPAAKRASTTHPPYYQKGSATKEAAPDNVYMTCQEMNRDNTSLSSKFNITWNFPVNKGRDRYLVRLHFCDIVSPVLNVLYFDVYINGYYAYKDLDLSSLTIHLLSSPVYVDFIIDSHDSGVIEVSVGPSDLSSSLRMNAILNGAEIMKIVDVVNSHVVSKKKKIGVLVGSIVGGVLVLCFAFALLFALKCKKKKLKRRPTGSSGWTALRVFGASSRTRTSEGTTYASPNPNGYFALKIPFADVQFATNNFDKNLIIGSGGFGTVYKGVLKDNTKVAVKRGMPGSRQGLPEFHTEITVLSKIRHQHLVSLVGYCEELSEMILVYEYVEKGPLKKHLYGSTLPKLSWKQRLEICIGAARGLHYLHTGFTQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSLGVVLFEVLCARPAVDPLLSRDQVNLAEWALEWQQKGMVDQIIDRNIVGQIKPNCLKKFVETAEKCLNEYGVDRPTMGDVLWNLEYALQLQESGRQIEQQAESESNVSDIETSGNPHGASCLRTEAEDGTGSSDISTTRVFSQLITNEGR* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00299 827 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00299 827 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Pte16g00299 827 FunFam Receptor-like protein kinase FERONIA 567 783 - -
Pte16g00299 827 Pfam Protein tyrosine and serine/threonine kinase 496 758 IPR001245 GO:0004672|GO:0006468
Pte16g00299 827 SUPERFAMILY Protein kinase-like (PK-like) 464 761 IPR011009 -
Pte16g00299 827 Gene3D Transferase(Phosphotransferase) domain 1 567 790 - -
Pte16g00299 827 FunFam Putative receptor-like protein kinase 29 180 - -
Pte16g00299 827 Pfam Malectin-like domain 32 390 IPR024788 -
Pte16g00299 827 Gene3D Phosphorylase Kinase; domain 1 454 566 - -
Pte16g00299 827 MobiDBLite consensus disorder prediction 776 814 - -
Pte16g00299 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Pte16g00299 827 SMART serkin_6 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00299 827 FunFam Receptor-like protein kinase FERONIA 207 392 - -
Pte16g00299 827 CDD STKc_IRAK 497 762 - -
Pte16g00299 827 MobiDBLite consensus disorder prediction 776 796 - -
Pte16g00299 827 Gene3D - 29 182 - -
Pte16g00299 827 Gene3D - 207 391 - -
Pte16g00299 827 FunFam receptor-like protein kinase FERONIA 454 566 - -
Pte16g00299 827 PANTHER OS07G0166700 PROTEIN 478 768 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00299 Pte-Chr16 3917185 3920989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00299 9 828 Receptor kinase-like Gene Family AT3G46290 49.108 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pte16g00299 Malectin_like 9.8e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00299 - - qsa:O6P43_008165 1154.81