Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00295 ATGAACAATTTCAACCTGAAGAATACAAACCGTTTTGCTTTTCATCCTTTTTACCAATCCCAACAACAGCTGTTTCAGCAGCAGCAGCCTGCTCTGTTTCATGACCCGTCTTCTCAGATTGCTCGCCTGACTCAGCAAAATTGGATTGGTAAACGTAACCTCGCAGAGTTTCAGACACATCAAAACAACACGATGCTTAGTAATCTCCTTCTCAGGTCTGTAAAGCCTAGAACTCTTCAGCAAGGGTCGCCTCTTTCACCTACGTCCCCCATGGATTTCTCTATGTCACCTGAATTGTCTAATACTTCTTCTCCAGTTCTCGCCATGCCTTCATCTCAGAGGGTTGATAGTATCCCACGTGTTCAGCAGAATATCCGTCCAAATCAGGTCCATATTTCACATGGGTCGACTCTGCGTTTACCCATGGGTAATCATGCTGTAAACGCTGCCTTAGTAGGAAAACCAAATGGGGGTGGTTTTACTCCGAAAAATACTGCCGTGCGTCAGGTTCAGGTTCAAAAAGGGAGTTTCATATTTCCGCAGGAATCTGAGAAGGATGTTATGGATAATCGTCTTCTGGCATTGGAGAAACAGCTTCTCGAAGATGATAATGATGAAGGTCATGCGGTTTCTGTGATTACCGACAAAGAGTGGTCAGATGCTATTCAGAATCTGTTTTCTCCTGCAACTCAGAACCAGAAGCCTATTTCAACATCACCCGCTTCGTCGACGACTTCGACGTCATGTTCGTCTTCATCATCGGTAGCTTCCCCTGCTTCCAATTGTTGGAAACAGTCTATAATGGAGGCTGCATCTGCGATTTCCGAAGGTAAATCAAATATTGCTTCAGAGATCCTCACGCGCCTGATTCAAATTTCAAACCCAGATGGAAGTTCTGAGCAGAGATTGACATATTACATGGTCGCAGCATTGAAATCCCGAGTTAACCCGGCTTTAAACCCACCTCAGATAATGGAGCTCTTCAGCAAAGAACACAACGAGTCAACTCAATTTCTCTACGACTTGTCACCCTGCTTCAAACTTGGTTTCATGGCAGCCAACCTTGCAATACTTGAGGCAACATTAGATGATGAAGAACCAGAAACAAAACTCCATGTGATCGATTTCGATGTTGGACAAGGAAACCAATACTGTCATCTTCTCCACTCACTCGCTGCCCGTCAGAACGGGAAACCCACCACCATAAGGATCACAGCAATAGCTGACAATAGCGATGAAGAGAAGTTGCAGTGTGTGGGAGAAATTCTGAGACACCTAGCTGAACGATTTGGTTTCCATTTTGGATTCAAAGTAGCGAGTCATCACACACTTGGACCGGGAGAACTGAGCCGTAACTCGCTCAGGTGCGTTCCCGATGAGTCTATTGCTATCAATTTTGCTTTCAACCTTTACAAAACGCTTGACGAGAGCGTGTCGGTTGATAACCCCCGAGACTCACTTCTCCGGGGAATCAAGAGTTTGGCGCCGCGAGTGGTGACGGTGGTGGAGCAAGAGTTGAACACAAATACGGCATCGTTCATGACCCGAGTTGCGGGGGCATGTTCATACTACGGAGCACTGTTTGAGTCACTCGATTCGACTGTGTCCAGAGACAACCCAAACCGAGTCAAAGTCGAAGGAGCACTGAGTCGGAAACTGAGCAACTCCATTGCTTGTGAAGGAAGAGATCGTGTTGAACGATGTGAAGTGTTTGGAAAGTGGAGGGCTCGCATGGGCATGGCTGGGTTCGAGTTAATGCCAGTGAGTCAAAACATCGCTGAGTCACTGAGAGCTCGTCTCCACTCAGGTAACAGAGTCAATCCGGGATTTTCAGTGAAGCACGAGAATGGAGGGATTTGCTTAGGTTGGATGGATCGAACACTCACAGTCGCATCTGCTTGGCGTTAA 1908 0.4665 MNNFNLKNTNRFAFHPFYQSQQQLFQQQQPALFHDPSSQIARLTQQNWIGKRNLAEFQTHQNNTMLSNLLLRSVKPRTLQQGSPLSPTSPMDFSMSPELSNTSSPVLAMPSSQRVDSIPRVQQNIRPNQVHISHGSTLRLPMGNHAVNAALVGKPNGGGFTPKNTAVRQVQVQKGSFIFPQESEKDVMDNRLLALEKQLLEDDNDEGHAVSVITDKEWSDAIQNLFSPATQNQKPISTSPASSTTSTSCSSSSSVASPASNCWKQSIMEAASAISEGKSNIASEILTRLIQISNPDGSSEQRLTYYMVAALKSRVNPALNPPQIMELFSKEHNESTQFLYDLSPCFKLGFMAANLAILEATLDDEEPETKLHVIDFDVGQGNQYCHLLHSLAARQNGKPTTIRITAIADNSDEEKLQCVGEILRHLAERFGFHFGFKVASHHTLGPGELSRNSLRCVPDESIAINFAFNLYKTLDESVSVDNPRDSLLRGIKSLAPRVVTVVEQELNTNTASFMTRVAGACSYYGALFESLDSTVSRDNPNRVKVEGALSRKLSNSIACEGRDRVERCEVFGKWRARMGMAGFELMPVSQNIAESLRARLHSGNRVNPGFSVKHENGGICLGWMDRTLTVASAWR* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00295 635 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 247 629 IPR005202 -
Pte16g00295 635 MobiDBLite consensus disorder prediction 226 258 - -
Pte16g00295 635 MobiDBLite consensus disorder prediction 78 104 - -
Pte16g00295 635 Pfam GRAS domain family 265 635 IPR005202 -
Pte16g00295 635 ProSiteProfiles GRAS family profile. 254 635 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00295 Pte-Chr16 3881353 3883260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00295 22 636 GRAS Transcription Factor Family AT5G52510 45.356 4.08e-151 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte16g00295 GRAS 1.2e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00295 - - qsa:O6P43_008171 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00295 16 3881353 3883260 Pte16g00295 16 3881353 3883260 RCT