Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00291 ATGGCCGGTGAGGTTGGCAAGAAGGAAGAAGAGGTGAGGGTGAAAATCATTGGTAAAAGCCACGCCAAACCGGAGAAGAGACTTGGGAGGAAAGAGTGTCAACTGGTCACATTTGATCTACCTTATCTTGCTTTTTACTACAACCAAAAGCTCTTGTTTTACAAAGGGGATGACGACGACTTTGACTTTGAGGGAATGGTGAAGAAGTTGAAGAATGGATTGAGTGCGGTTTTGGAAGAGTTTTATCAATTAGCTGGGAGGATTGGGAAAGATGAGGATGGAGTGTTGAGAGTGGAGTATGATGATGAAATGCCTGGAGTTGAGATCTTTGAAGCTGCTACTGTAGATGATGAAATTGCCATTGCAGATCTTACTGCTCAACAGGATACCTCCACTTTGAAAGAATTCATACCTTACAATGATGTATTAAATTTGGAAGGGATGCACAAGCCATTGTTGGCAATTCAGCTCACTAAATTGAAAGATGGACTTGCAATGGGATGCGCGTTCAACCACGCAGTCCTGGACGGTAGCTCTACTTGGCACTTTATTAGTTCCTGGGCCGAGATCTGTCGTGGGTCCCAGATCACAGCGCAACCATTTCTGGACCGTACCAAGGCACGCAACACGCGCGTGAAGCTCGACCTTTCACTTCCTCCAGATGTACACCCCTACTCATCCGACGGCTCTCACGATGTCAAACGGGCCCCACAACTTAGGGAGAAGGTTTTCAAATTCTCCGAAGCTCAAATCGACAAGATAAAGTCAATGGTCAACGAGATACTCCCATCGGAAGGCTTGAAACCATTCTCAACATTCCAGTCACTCTCCGTCCACATTTGGCGTCACATATCCCATGCACGTAACTTAAAACCAGCGGACTTCACAGTGTTCGCTGTCTTTGCCGATTGCCGGAAACGGGTTGAGCCACCATTGCCGGACTACTTTGGCAACCTAATACAAGCAGTGTTCACCGTCACAGCCGCTGGATTATTGACTGGTAACCCACCAGACTATGGAGCGTCAATGATACAGAAAGCAATTGAGATGCACAACTCAAAGGCCATTGATGAAAAGTGCAAGGAGTGGGAGAGAGAACCTAAGATATTTCAGTACAAGGATGCTGGGCCTAACTGTGTCGTGGTCGGTAGCTCACCGAGGTTTAAGGTTTACGAGGTGGATTTCGGATGGGGTAAGCCGGAGTGTGTGAGAAGTGGCTCCAATAATAGGTTTGATGGGGTGGTATATTTGTATCAAGGGAAGAATGGTGGGAGAAGCATCGATGTGGAGATAAGCTTGGAAGCTGGGGCCATGGAAAGGTTGGAGAAAGACAGGGAGTTTCTTCTGGAGCTCTGA 1356 0.4712 MAGEVGKKEEEVRVKIIGKSHAKPEKRLGRKECQLVTFDLPYLAFYYNQKLLFYKGDDDDFDFEGMVKKLKNGLSAVLEEFYQLAGRIGKDEDGVLRVEYDDEMPGVEIFEAATVDDEIAIADLTAQQDTSTLKEFIPYNDVLNLEGMHKPLLAIQLTKLKDGLAMGCAFNHAVLDGSSTWHFISSWAEICRGSQITAQPFLDRTKARNTRVKLDLSLPPDVHPYSSDGSHDVKRAPQLREKVFKFSEAQIDKIKSMVNEILPSEGLKPFSTFQSLSVHIWRHISHARNLKPADFTVFAVFADCRKRVEPPLPDYFGNLIQAVFTVTAAGLLTGNPPDYGASMIQKAIEMHNSKAIDEKCKEWEREPKIFQYKDAGPNCVVVGSSPRFKVYEVDFGWGKPECVRSGSNNRFDGVVYLYQGKNGGRSIDVEISLEAGAMERLEKDREFLLEL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00291 451 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 448 - -
Pte16g00291 451 Pfam Transferase family 13 447 - -
Pte16g00291 451 FunFam Tryptamine hydroxycinnamoyl transferase 226 445 - -
Pte16g00291 451 Gene3D - 8 216 IPR023213 -
Pte16g00291 451 Gene3D - 225 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00291 Pte-Chr16 3833642 3835539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00291 46 452 Monolignol Biosynthesis Gene Families AT5G48930 29.577 2.84e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00291 K19747 - qsa:O6P43_008177 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00291 16 3833642 3835539 Pte16g00291 16 3833642 3835539 RCT